Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=1746732 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| ||||| | | ||||||||||| |||||||||||| | |||||| ||| || Sbjct 1066553 AACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTC 1066612 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 |||||||||||||| | || | | ||| || || ||||| |||||||| ||||| | Sbjct 1066613 GAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTC-TT 1066671 Query 138525 GATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || | || | |||| | || | || |||| ||||| || |||| || | |||| Sbjct 1066672 GAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATAGTTT 1066731 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || |||| ||| || || || || ||||| Sbjct 1066732 TCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261432288320