Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 seq13 104 2e-17 >seq1 Length=1746732 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||| | |||||||| | |||||||| ||||| || ||||| ||| Sbjct 1066535 TCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGA 1066594 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| || || || ||||| || ||| | ||||| | ||||||||| ||||| Sbjct 1066595 GAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGG 1066654 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| || || ||| | | |||| || || | | |||||| Sbjct 1066655 GATACCTTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGAC 1066714 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || | ||||| || |||| ||| || || || || ||||| Sbjct 1066715 TTCGAGAGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762 >seq13 Length=658505 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | |||||||| || || || |||||||| Sbjct 563809 CCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGAT 563868 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | | ||| || ||||| ||||||||| ||||||| | ||| ||||| || || Sbjct 563869 AGAGTCCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGG 563928 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | |||| |||||| | | ||| || Sbjct 563929 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 563988 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGA 127093 |||| ||| | || || || || ||| Sbjct 563989 TCGAGGGTGATGGTCTTACCTGTAAGA 564015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499872773440