Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 1e-19
seq13 96.9 8e-15
>seq1
Length=1746732
Score = 113 bits (124), Expect = 1e-19
Identities = 130/175 (74%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 199452 TGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCT 199511
|||| |||| ||| ||||| |||||||| ||||||||||| || ||||| ||||||||||
Sbjct 1066357 TGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCT 1066416
Query 199512 GGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTG 199571
| || || ||| || || || |||||||| ||||| |||| || || |
Sbjct 1066417 GATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGG 1066476
Query 199572 TTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| ||||| ||||||||||| || || || || | |||||| ||||| |||||
Sbjct 1066477 AAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTG 1066531
Score = 87.8 bits (96), Expect = 4e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| || || | || || || ||||||||||||| ||||||||| | | |||
Sbjct 1066542 CGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTA 1066601
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||| || || || |||||||| || | | |||||| || ||| || |||
Sbjct 1066602 CGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCT 1066661
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| ||| ||| |||| || || | | || || || |
Sbjct 1066662 TCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGA 1066721
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || || || | ||| || || || |||||
Sbjct 1066722 GTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTG 1066759
>seq13
Length=658505
Score = 96.9 bits (106), Expect = 8e-15
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| | || ||||| |||||||| |||| |||||| || | | ||||
Sbjct 563815 CGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTC 563874
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| ||||| || ||||||||||| |||||||| | | ||| || || || || ||
Sbjct 563875 CTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCC 563934
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || |||| |||||| | | || || || |
Sbjct 563935 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGG 563994
Query 199589 GTGATCGTCTTACCCGTGAGA 199609
||||| |||||||| || |||
Sbjct 563995 GTGATGGTCTTACCTGTAAGA 564015
Score = 84.2 bits (92), Expect = 5e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
|||||||| ||||||||| | || ||||| |||||| | | ||||||||| |||||||
Sbjct 563906 ATCTTCGCTGGAAAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAG 563847
Query 200998 GAGTCTACTCTTCA 201011
||||||||||||||
Sbjct 563846 GAGTCTACTCTTCA 563833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178919243630452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |