Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 seq13 87.8 2e-12 >seq1 Length=1746732 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||| | |||| |||||||||||| ||||||||||| ||||| || |||| ||| Sbjct 1066554 ACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCG 1066613 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || || || |||||||| ||||| | |||||| || | || | | |||||||| Sbjct 1066614 AGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGA 1066673 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | ||| ||| || || || || | ||||| ||||| Sbjct 1066674 ATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATAGTTTTC 1066733 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || || ||||||||||| Sbjct 1066734 CCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762 >seq13 Length=658505 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||| | ||| |||||| ||||| ||||| || |||||||| | | || ||| Sbjct 563827 ACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATCCTCG 563886 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || ||||| ||||| | ||| || || | || | | |||||||||| | Sbjct 563887 AGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGG 563946 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| | | | |||||| || || || || | |||||||| || Sbjct 563947 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTA 564006 Query 46565 CCCGTCAG 46572 || || || Sbjct 564007 CCTGTAAG 564014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237297785120