Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-17
>seq1
Length=1746732
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || | || || ||||| ||||| |||| |||||| | ||
Sbjct 1066762 ATGCAAATCTTCGTCAAGACTTTGACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCC 1066703
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | || | | | ||||| || || | ||||| || || || || | || ||
Sbjct 1066702 GATA-CGATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCA 1066644
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | |||| ||| || ||||| || || |||| || || ||| |||||||||
Sbjct 1066643 GCAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAA 1066584
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||||||| | || || |||||||| || ||
Sbjct 1066583 CATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCG 1066548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171824663040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |