Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=1746732 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || ||||| ||||| |||| |||||| | || Sbjct 1066762 ATGCAAATCTTCGTCAAGACTTTGACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCC 1066703 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | || | | | ||||| || || | ||||| || || || || | || || Sbjct 1066702 GATA-CGATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCA 1066644 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | |||| ||| || ||||| || || |||| || || ||| ||||||||| Sbjct 1066643 GCAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAA 1066584 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||||| | || || |||||||| || || Sbjct 1066583 CATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCG 1066548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171824663040