Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq2 116 3e-20
>seq2
Length=1129421
Score = 116 bits (128), Expect = 3e-20
Identities = 711/1137 (63%), Gaps = 4/1137 (0%)
Strand=Plus/Minus
Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309
|| || ||||| | || ||||| || |||||||| | ||| || |||||||| |||
Sbjct 511357 TTGTCGGCGGCGGAGACGTTAAGGATGGAGTTGGCATCGATATCGAAGGTGACTTCGATT 511298
Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369
|| ||||| || | |||| ||||| || || | | || |||| || ||
Sbjct 511297 TGGGGGACACCACGAGGAGCGGGTGGAATACCGGTGAGCTCGAACTTTCCGAGGAGGTTG 511238
Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429
||| || || | ||||||||||| | | ||||| || | | || ||
Sbjct 511237 CAATCCTTGGTTCGTGCACGTTCACCCTCATAGACCTGGATGAGCACACCTGGCTGGTTG 511178
Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489
|| || || || | || | | ||| ||||| ||||| || ||||||| | ||
Sbjct 511177 TCCGAGTAGGTGGAGAAGATTTCGGACTTTTTGGTAGGAACGGTGGTGTTTCGCTTGATG 511118
Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549
| |||||| | |||||| || || || | ||| ||| ||||||| ||| || |
Sbjct 511117 AGCGGGGTCATGACACCACCAGCGGTCTCGATACCGGTAGAGAGAGGAGCGACGTCGAGC 511058
Query 517550 AGGACAATATTTTGAAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGC 517608
| || | || || || ||| | || | | ||| || ||||| ||||||| |||
Sbjct 511057 AAGAGGAGATCCTGG-GTCTTTGACGAGGTGTCACCGGTGAGGATAGCGGCTTGAACAGC 510999
Query 517609 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 517668
|||||| ||||| || |||||||| || || | | ||| ||| ||| |||
Sbjct 510998 AGCACCGTATGCGACGGCTTCATCGGGGTTGATCGAACGGTTTGGTTCACGACCGGAGAA 510939
Query 517669 AAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728
| | || | || | | | || || ||||||| || || || || | || ||
Sbjct 510938 CATGTCGGATACGAGCTTTTGAATTTTTGGGATACGAGTGGAACCACCGACGAGGACGAT 510879
Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788
|| || | || || | |||||| || | ||| || || || || || |
Sbjct 510878 CTCGCTGACGGAAGCCTTGTCGATTTTTGAGTCTTTGAGAACCTTCTCGACCGGGTCCAT 510819
Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848
|| || || | ||| || || || |||||| ||| | || | | | |
Sbjct 510818 GGTCGATCGGAAGAGGTCCTGGCAGAGCTCCTCGAATCGAGCACGGGTGATCGAGGTGTA 510759
Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908
| ||| || || || || | || |||| || |||| || || | | ||||| ||
Sbjct 510758 AAGATCGATACCGTCAAAGAGGGAGTCAATCTCGATCGAGGTCTGCGCGGCGGAAGAGAG 510699
Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT 517968
| || || ||||||||||| || || | || | || | || || | | |||
Sbjct 510698 GGTTCGCTTGGCACGTTCACACGCGGTTCGGAGACGACGGAGAGCACGAGC-GTTGGATG 510640
Query 517969 CAA-ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTAT 518027
|| ||| | || | || |||||||| || | |||| | | || ||||| || |
Sbjct 510639 AAAGATCCTTCTTGTTCTTCCTCTTGAACTCCTGAACAAAGTGGTTGACGAGACGGTTGT 510580
Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 518087
| || |||||||| ||||| | || | || | || || | || | ||| | || |
Sbjct 510579 CGAAGTCTTCACCACCCAAATGGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATACCCT 510520
Query 518088 CTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147
| || | || | |||| |||||| || ||||| |||| || || || || || |
Sbjct 510519 CCTCGATAGTAAGGAGAGATACATCGAAAGTACCACCTCCCAAGTCGAAGATGAGAACGT 510460
Query 518148 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207
|| | || | || || || || || || || | ||||| |||||||| || |
Sbjct 510459 TCTTCTCACCTGCGGACTTCTTGTCGAGTCCGTATGCGATGGCAGCGGCAGTTGGCTCGT 510400
Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267
| || |||| | ||||| |||||||| || || ||||| || || ||||| | |
Sbjct 510399 TGATGATTCGGAGGACATTGAGACCAGCGATCAAACCGGCATCCTTGGTAGCTTGACGCT 510340
Query 518268 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATAT 518327
| || ||||| || || || || || || | |||||||| | || || ||| | |
Sbjct 510339 GAGAGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCATCCTTGACGTCACCACCGAGGT 510280
Query 518328 AAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384
|||| ||| || | | ||| || | | || ||| ||||| || | |||||||
Sbjct 510279 AAGCCTCTGCGGTCTCTCGCATCTTGATGAGAACCATGGATGAGATCTCCTCTGGGG 510223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780814658766136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |