Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-20 >seq2 Length=1129421 Score = 116 bits (128), Expect = 3e-20 Identities = 711/1137 (63%), Gaps = 4/1137 (0%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 || || ||||| | || ||||| || |||||||| | ||| || |||||||| ||| Sbjct 511357 TTGTCGGCGGCGGAGACGTTAAGGATGGAGTTGGCATCGATATCGAAGGTGACTTCGATT 511298 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 || ||||| || | |||| ||||| || || | | || |||| || || Sbjct 511297 TGGGGGACACCACGAGGAGCGGGTGGAATACCGGTGAGCTCGAACTTTCCGAGGAGGTTG 511238 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 ||| || || | ||||||||||| | | ||||| || | | || || Sbjct 511237 CAATCCTTGGTTCGTGCACGTTCACCCTCATAGACCTGGATGAGCACACCTGGCTGGTTG 511178 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489 || || || || | || | | ||| ||||| ||||| || ||||||| | || Sbjct 511177 TCCGAGTAGGTGGAGAAGATTTCGGACTTTTTGGTAGGAACGGTGGTGTTTCGCTTGATG 511118 Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549 | |||||| | |||||| || || || | ||| ||| ||||||| ||| || | Sbjct 511117 AGCGGGGTCATGACACCACCAGCGGTCTCGATACCGGTAGAGAGAGGAGCGACGTCGAGC 511058 Query 517550 AGGACAATATTTTGAAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGC 517608 | || | || || || ||| | || | | ||| || ||||| ||||||| ||| Sbjct 511057 AAGAGGAGATCCTGG-GTCTTTGACGAGGTGTCACCGGTGAGGATAGCGGCTTGAACAGC 510999 Query 517609 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 517668 |||||| ||||| || |||||||| || || | | ||| ||| ||| ||| Sbjct 510998 AGCACCGTATGCGACGGCTTCATCGGGGTTGATCGAACGGTTTGGTTCACGACCGGAGAA 510939 Query 517669 AAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 | | || | || | | | || || ||||||| || || || || | || || Sbjct 510938 CATGTCGGATACGAGCTTTTGAATTTTTGGGATACGAGTGGAACCACCGACGAGGACGAT 510879 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 || || | || || | |||||| || | ||| || || || || || | Sbjct 510878 CTCGCTGACGGAAGCCTTGTCGATTTTTGAGTCTTTGAGAACCTTCTCGACCGGGTCCAT 510819 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848 || || || | ||| || || || |||||| ||| | || | | | | Sbjct 510818 GGTCGATCGGAAGAGGTCCTGGCAGAGCTCCTCGAATCGAGCACGGGTGATCGAGGTGTA 510759 Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908 | ||| || || || || | || |||| || |||| || || | | ||||| || Sbjct 510758 AAGATCGATACCGTCAAAGAGGGAGTCAATCTCGATCGAGGTCTGCGCGGCGGAAGAGAG 510699 Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT 517968 | || || ||||||||||| || || | || | || | || || | | ||| Sbjct 510698 GGTTCGCTTGGCACGTTCACACGCGGTTCGGAGACGACGGAGAGCACGAGC-GTTGGATG 510640 Query 517969 CAA-ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTAT 518027 || ||| | || | || |||||||| || | |||| | | || ||||| || | Sbjct 510639 AAAGATCCTTCTTGTTCTTCCTCTTGAACTCCTGAACAAAGTGGTTGACGAGACGGTTGT 510580 Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 518087 | || |||||||| ||||| | || | || | || || | || | ||| | || | Sbjct 510579 CGAAGTCTTCACCACCCAAATGGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATACCCT 510520 Query 518088 CTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147 | || | || | |||| |||||| || ||||| |||| || || || || || | Sbjct 510519 CCTCGATAGTAAGGAGAGATACATCGAAAGTACCACCTCCCAAGTCGAAGATGAGAACGT 510460 Query 518148 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207 || | || | || || || || || || || | ||||| |||||||| || | Sbjct 510459 TCTTCTCACCTGCGGACTTCTTGTCGAGTCCGTATGCGATGGCAGCGGCAGTTGGCTCGT 510400 Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267 | || |||| | ||||| |||||||| || || ||||| || || ||||| | | Sbjct 510399 TGATGATTCGGAGGACATTGAGACCAGCGATCAAACCGGCATCCTTGGTAGCTTGACGCT 510340 Query 518268 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATAT 518327 | || ||||| || || || || || || | |||||||| | || || ||| | | Sbjct 510339 GAGAGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCATCCTTGACGTCACCACCGAGGT 510280 Query 518328 AAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 |||| ||| || | | ||| || | | || ||| ||||| || | ||||||| Sbjct 510279 AAGCCTCTGCGGTCTCTCGCATCTTGATGAGAACCATGGATGAGATCTCCTCTGGGG 510223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780814658766136