Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 349 4e-91 seq12 116 5e-21 >seq2 Length=1129421 Score = 349 bits (386), Expect = 4e-91 Identities = 834/1252 (67%), Gaps = 22/1252 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 |||||||| | || ||||| || || || |||||| || || || || || || Sbjct 511468 TCATCTTCTGCCTTGTACTTCTCAGCGTCGGCGACCATGCGCTCGATCTCCTCCTTTGAG 511409 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || || ||||| | ||||| | || ||| || | Sbjct 511408 AGACGACCCTTGTCGTTGGTGATGGTGATCTTGCCACTCTTACCGGTGGTCTTGTCGGCG 511349 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || || | || || ||||| | |||||| | || | ||||| || | Sbjct 511348 GCGGAGACGTTAAGGATGGAGTTGGCATCGATATCGAAGGTGACTTCGATTTGGGGGACA 511289 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || |||| ||||||||| || | || || | || || | || |||| | Sbjct 511288 CCACGAGGAGCGGGTGGAATACCGGTGAGCTCGAACTTTCCGAGGAGGTTGCAATCCTTG 511229 Query 6809 GCCTTCTT--ACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTG 6866 | ||| | ||||||||| |||||||| | || ||| | || || || || Sbjct 511228 G--TTCGTGCACGTTCACCCTCATAGACCTGGATGAGCACACCTGGCTGGTTGTCCGAGT 511171 Query 6867 CCGTTGAGAAGATTT-GTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 || |||||||||| | |||| || | |||| || || |||| | || | |||| Sbjct 511170 AGGTGGAGAAGATTTCGGACTTT-TTGGTAGGAACGGTGGTGTTTCGCTTGATGAGCGGG 511112 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTC---CAAGAGT 6982 ||||| | |||||| || |||| || ||| ||||| | ||||| |||||| Sbjct 511111 GTCATGACACCACCAGCGGTCTCGATACCGGTAGAGAGAGGAGCGACGTCGAGCAAGAGG 511052 Query 6983 AACA----GGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGT 7038 | |||||| || || || |||| || | ||| |||||||| || | Sbjct 511051 AGATCCTGGGTCTTTGAC-GAGGTGT------CACCGGTGAGGATAGCGGCTTGAACAGC 510999 Query 7039 CGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAA 7098 || ||||||||||| || ||||||||||| |||| || |||| |||| || Sbjct 510998 AGCACCGTATGCGACGGCTTCATCGGGGTTGATCGAACGGTTTGGTTCACGACCGGAGAA 510939 Query 7099 ATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGAT 7158 || |||| | | ||||||||| ||||| || || || |||||||| | ||||| Sbjct 510938 CATGTCGGATACGAGCTTTTGAATTTTTGGGATACGAGTGGAACCACCGACGAGGACGAT 510879 Query 7159 TTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218 || | || | || ||||| ||||||||| || || ||||| || ||||| Sbjct 510878 CTCGCTGACGGAAGCCTTGTCGATTTTTGAGTCTTTGAGAACCTTCTCGACCGGGTCCAT 510819 Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATA 7278 ||||| | |||| || || ||||| || || |||||||| || || || || Sbjct 510818 GGTCGATCGGAAGAGGTCCTGGCAGAGCTCCTCGAATCGAGCACGGGTGATCGAGGTGTA 510759 Query 7279 GAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAA 7338 | ||| | ||||| | | || ||||| || || | || || || | ||||| | Sbjct 510758 AAGATCGATACCGTCAAAGAGGGAGTCAATCTCGATCGAGGTCTGCGCGGCGGAAGAGAG 510699 Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 |||||||| || || |||||||| ||||| | |||||| || ||||| | ||| || Sbjct 510698 GGTTCGCTTGGCACGTTCACACGCGGTTCGGAGACGACGGAGAGCACGAGCGTTGGATGA 510639 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATC 7458 || ||| ||||| | || | || ||||| | | ||||| | ||| | || Sbjct 510638 AAGATCCTTCTTGTTCTTCCTCTTGAACTCCTGAACAAAGTGGTTGACGAGACGGTTGTC 510579 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 ||| |||||||||||||| || || || || ||||| || ||||| || |||||||| | Sbjct 510578 GAAGTCTTCACCACCCAAATGGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATACCCTC 510519 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 || || | | | || ||||| || |||||||| |||| ||| || ||||| ||||| Sbjct 510518 CTCGATAGTAAGGAGAGATACATCGAAAGTACCACCTCCCAAGTCGAAGATGAGAACGTT 510459 Query 7579 CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 | | || | | ||||| ||||| ||||| ||||| || || || ||||| || || Sbjct 510458 CTTCTCACCTGCGGACTTCTTGTCGAGTCCGTATGCGATGGCAGCGGCAGTTGGCTCGTT 510399 Query 7639 AATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 || || | || |||| || || ||||| || | ||||| || || ||||| || | Sbjct 510398 GATGATTCGGAGGACA-TTGAGACCAGCGATCAAACCGGCATCCTTGGTAGCTTGACGCT 510340 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || ||||| |||||||| ||||| || ||||| || ||| |||| | |||||| | Sbjct 510339 GAGAGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCATCCTTGACGTCACCACCGAGGT 510280 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | | || ||| | ||| ||| ||| | |||||||| ||||| ||||| || Sbjct 510279 AAGCCTCTGCGGTCTCTCGCATCTTGATGAGAACCATGGATGAGATCTCCTC 510228 >seq12 Length=685287 Score = 116 bits (128), Expect = 5e-21 Identities = 191/276 (69%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||||||||| |||||||| ||||| || ||||| ||||| || || | ||| Sbjct 213309 ATCGAAATCTTCACCTCCCAAGTGGGTATCACCGTTGGTCGACTTGACCTCGAACACACC 213250 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || || | | | || ||||| || ||||||||||| || || ||| | | Sbjct 213249 CTTTTGCATCTCAAGGATGGAGACATCGAATGTACCACCACCAAGATCGTAAACGGCGAT 213190 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | | | || |||||| || |||||||| |||| ||| || || || || || Sbjct 213189 GATGGAA------GATTCGTTCTTGTCAAGACCGTAAGCGAGAGCAGCAGCAGTGGGCTC 213136 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || | ||| ||| || || ||||| || | | || || || || || || || Sbjct 213135 GTTGATGACACGGAGAACGTCGAGACCAGCGATCGAACCAGCGTCCTTGGTAGCCTGACG 213076 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 ||| || ||||| |||||||||||||| || | ||| Sbjct 213075 TTGAGAGTCGTTGAAGTAGGCCGGGACGGTGATGAC 213040 Score = 114 bits (126), Expect = 2e-20 Identities = 185/266 (70%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||||||||| || || || || ||||| || ||||| | || | || Sbjct 602190 TCGAAGTCCTCACCACCCAAATGGGTGTCACCAGCGGTAGCCTTGACAGCGAAAACGCCA 602249 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | || ||||| || |||||||| || || || |||||||| || Sbjct 602250 CCAGTGATGGAAAGAAGGGAGACATCGAAAGTACCACCTCCGAGATCGAAAATGAGCACA 602309 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | || || | | || | ||||||||||| ||||| || || || || || ||| Sbjct 602310 ATCTTCTCCTCCTTGGTCTTGGTGTCGAGACCGTAGGCGATGGCAGCAGCGGTGGGCTCA 602369 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| ||| || || || ||||| | | || || || || || | || Sbjct 602370 TTGATGATACGGAGAACGTCGAGACCGGCAATGGCACCAGCGTCCTTGGTAGCGAGACGC 602429 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGAC 7722 || || ||||| |||||||| ||||| Sbjct 602430 TGAGAGTCGTTGAAGTAGGCTGGGAC 602455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131561491040