Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 1e-25
seq13 120 7e-22
>seq1
Length=1746732
Score = 132 bits (146), Expect = 1e-25
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
||||| || ||||| ||||| || ||||| |||| ||||| | || |||||||| ||
Sbjct 1066560 TGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCGAGTTGT 1066619
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| ||||| || | | || || || ||||| || ||||| ||||||||||| ||
Sbjct 1066620 TTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGAATCTTG 1066679
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||| ||||| || || || || ||| || ||||| || || | || || ||||||
Sbjct 1066680 GACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATAGTTTTCCCTGTC 1066739
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
||||| || ||||| | ||||||
Sbjct 1066740 AAAGTCTTGACGAAGATTTGCAT 1066762
Score = 107 bits (118), Expect = 4e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022
||||||| | | || || ||||||||||||||||| || || |||||||| || || |
Sbjct 1066357 TGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCT 1066416
Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082
| || || ||||| || || ||||||||||| || || || || || || || || |
Sbjct 1066417 GATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGG 1066476
Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| || || || | || | || || |||||||||||||| || || | |||||||
Sbjct 1066477 AAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535
Score = 84.2 bits (92), Expect = 5e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 194960 TATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTT 195019
|| |||| |||| ||||||| ||||||||||||||||| || |||||||| || ||||
Sbjct 1264496 TACTGTAGTCGGAGAGAGTTCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTT 1264555
Query 195020 GTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053
|||| || || || || || || ||||| || ||
Sbjct 1264556 GTTGATCAGGTGGGATACCCTCCTTGTCCTGGAT 1264589
>seq13
Length=658505
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|||||||| ||||| || || || |||||||| | ||||| || ||||| |||||||||
Sbjct 563833 TGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATCCTCGAGCTGC 563892
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || |||||||| | | ||||| || || || || || || ||||| || || ||
Sbjct 563893 TTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGGATCTTG 563952
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||| || || |||||||| ||| || || || ||||| | ||||| |||||
Sbjct 563953 GACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCTGT 564011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109479382423652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |