Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 132 1e-25 seq13 120 7e-22 >seq1 Length=1746732 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || ||||| ||||| || ||||| |||| ||||| | || |||||||| || Sbjct 1066560 TGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCGAGTTGT 1066619 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| ||||| || | | || || || ||||| || ||||| ||||||||||| || Sbjct 1066620 TTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGAATCTTG 1066679 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| ||||| || || || || ||| || ||||| || || | || || |||||| Sbjct 1066680 GACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATAGTTTTCCCTGTC 1066739 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 ||||| || ||||| | |||||| Sbjct 1066740 AAAGTCTTGACGAAGATTTGCAT 1066762 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 ||||||| | | || || ||||||||||||||||| || || |||||||| || || | Sbjct 1066357 TGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCT 1066416 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 | || || ||||| || || ||||||||||| || || || || || || || || | Sbjct 1066417 GATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGG 1066476 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || || | || | || || |||||||||||||| || || | ||||||| Sbjct 1066477 AAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535 Score = 84.2 bits (92), Expect = 5e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 194960 TATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTT 195019 || |||| |||| ||||||| ||||||||||||||||| || |||||||| || |||| Sbjct 1264496 TACTGTAGTCGGAGAGAGTTCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTT 1264555 Query 195020 GTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053 |||| || || || || || || ||||| || || Sbjct 1264556 GTTGATCAGGTGGGATACCCTCCTTGTCCTGGAT 1264589 >seq13 Length=658505 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||| ||||| || || || |||||||| | ||||| || ||||| ||||||||| Sbjct 563833 TGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATCCTCGAGCTGC 563892 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | | ||||| || || || || || || ||||| || || || Sbjct 563893 TTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGGATCTTG 563952 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| || || |||||||| ||| || || || ||||| | ||||| ||||| Sbjct 563953 GACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCTGT 564011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479382423652