Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq10 109 6e-19 >seq10 Length=738709 Score = 109 bits (120), Expect = 6e-19 Identities = 261/395 (66%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 48153 AACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTC 48212 || |||||||| |||| ||||||||||| | ||| || |||| | || ||| | | | Sbjct 610488 AATCCAGGACACTCATGTGGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGC 610547 Query 48213 ATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTG 48272 || || | ||| || ||||| | || |||||||| | || || | |||||| || Sbjct 610548 ATGAAAAGATCCGGGATCCACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTA 610607 Query 48273 CCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATAT 48332 || ||| || || || | |||||| | | || || |||||||| || | || Sbjct 610608 CCGTGATTTTTTCGTAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAA 610667 Query 48333 ATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTA 48392 || || | |||||||||| || ||||| |||||||| | || | || || || Sbjct 610668 ATGGCAAAGGCACCTGGTCGCTTGTTACCACCTTGATCGACGTAACGAGCGGTTGCGTCG 610727 Query 48393 TAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTT 48452 ||| ||| | ||| || || ||||| || || || || || || | || ||| Sbjct 610728 TAAGCTCGAAGCATAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAA 610787 Query 48453 CCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGA 48512 || | || | || || ||| | ||| ||||||||||| | || || || | Sbjct 610788 CCCTTGGCACGAATGTTGTGAATGTTGAGACCGATACCACCTGCTGTCTTGGAGATCATG 610847 Query 48513 GCACACCGTTTAAGGGTATCATAAATTCCTTCTAT 48547 ||||| ||| || |||||||| || ||||| || Sbjct 610848 GCACAAGTTTTGAGAGTATCATAGATACCTTCGAT 610882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107703887840