Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 109 4e-18 seq2 100 2e-15 seq12 86.0 5e-11 >seq1 Length=1746732 Score = 109 bits (120), Expect = 4e-18 Identities = 160/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314 || ||||| || | |||||| ||| || ||||| || ||||| || | ||||| | Sbjct 1066545 AGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGG--ATGTTGTAGTCGGAGAGAGTAC 1066602 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||||| |||||||| ||||| ||||| | || |||||||||||||| || |||| Sbjct 1066603 GACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTT 1066662 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433 | || |||||||| || ||||| || || ||||| | || | | ||||||| Sbjct 1066663 CCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATC-GGAAGACTCGACTTCGAGA 1066721 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | |||||| || || | ||| || ||||| ||||||||| Sbjct 1066722 GTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCATA 1066763 >seq2 Length=1129421 Score = 100 bits (110), Expect = 2e-15 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381 ||||| | || ||||| |||||| | || || ||| | | || || |||| | Sbjct 510225 CCAGAGGAGATCTCATCCATGGTTCTCATCAAGATGCGAGAGACCGCAGAGGCTTACCTC 510284 Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441 ||| || || | |||||| || | || || ||||| || || || ||||| || ||| Sbjct 510285 GGTGGTGACGTCAAGGATGCCGTCGTCACCGTCCCAGCCTACTTCAACGACTCTCAGCGT 510344 Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501 |||||||| || ||||| || || ||||| || ||||| || || || ||||| || Sbjct 510345 CAAGCTACCAAGGATGCCGGTTTGATCGCTGGTCTCAATGTCCTCCGAATCATCAACGAG 510404 Query 550502 CCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || ||||| ||||| | ||||| ||||| || || Sbjct 510405 CCAACTGCCGCTGCCATCGCATACGGACTCGACAA 510439 >seq12 Length=685287 Score = 86.0 bits (94), Expect = 5e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 ||| || || || || || || || || ||||| |||||||| ||||| || || ||||| Sbjct 213039 AGTCATCACCGTCCCGGCCTACTTCAACGACTCTCAACGTCAGGCTACCAAGGACGCTGG 213098 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 || ||||| || | ||||| ||| | ||||| || || ||||||||||| || || Sbjct 213099 TTCGATCGCTGGTCTCGACGTTCTCCGTGTCATCAACGAGCCCACTGCTGCTGCTCTCGC 213158 Query 550522 ATATGGACTTGATAA 550536 || || ||||| || Sbjct 213159 TTACGGTCTTGACAA 213173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029287750016440