Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq10 109 1e-18
>seq10
Length=738709
Score = 109 bits (120), Expect = 1e-18
Identities = 381/578 (66%), Gaps = 19/578 (3%)
Strand=Plus/Plus
Query 221818 ATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAAT 221877
||| |||||||| ||||| ||||| || ||||| |||||||| ||| || | |||||
Sbjct 610328 ATTCGCAGCGTCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAAT 610387
Query 221878 CTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTG-ACTGCACCCTCGGTCTTTTCAT 221936
|| |||||||| | || | | | || || || ||| |||| ||| |
Sbjct 610388 AGCGTACCAGAGTTTTTGCGCTTTGATCATCTTCCTGTACTTG-CCCTGCCTCTCGTATG 610446
Query 221937 ACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG 221996
|| || ||||| ||| || | |||| | || ||| ||| || ||||||
Sbjct 610447 ACTCG-TATAGTTCATCGAAAGCCTTTCCATG-ACAA-TCGGCCAATCCAGGACACTCAT 610503
Query 221997 CGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGA 222056
|||||||||| | ||| | | |||| || | ||||||| || |||||||
Sbjct 610504 GTGGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGA 610563
Query 222057 TCCACAGCGCCTGAAAGAGATCTCTGGTCCG--CTGCTCCTCCACGCCGTTGTTTTTCCT 222114
|||||| ||| | || | ||| | | || || || || || ||| ||||| |
Sbjct 610564 TCCACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTAC--CGTGATTTTTTCG 610621
Query 222115 CAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCC 222174
||||| | ||| || |||| ||| |||||||| ||||| || || | ||| | || ||
Sbjct 610622 TAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACC 610681
Query 222175 GGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTG-AAGATGCGAAGGG 222233
||||||||||| ||||| ||||| || | | |||| | ||| | |||||
Sbjct 610682 TGGTCGCTTGTTACCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCT-CGAAGCA 610740
Query 222234 TCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCA 222293
| || || | ||||| || ||||| || || ||||| | ||| ||| | |
Sbjct 610741 TAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAA 610800
Query 222294 GGTT---ACTGGCAGACATGCCGATACCACCGGCGTGT-TTCGAGATCATGGCGCAGCTC 222349
||| | | | || | ||||||||||| || ||| || ||||||||||| || |
Sbjct 610801 TGTTGTGAAT-GTTGAGA--CCGATACCACCTGC-TGTCTTGGAGATCATGGCACAAGTT 610856
Query 222350 TTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTT 222387
|||||||| || ||| || || || || ||||||||
Sbjct 610857 TTGAGAGTATCATAGATACCTTCGATGGAATCCTCCTT 610894
Score = 91.5 bits (100), Expect = 3e-13
Identities = 150/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479
|| || |||||||| ||||||||||||||| | ||||||| | ||||| || |
Sbjct 609832 AGAGCTGCGTGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCCA 609891
Query 221480 GTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538
||| |||||||| || | |||| | | ||||| || || || || |||| ||| |
Sbjct 609892 TCGAATGGCATACGGAGAGCCATGAATG-CATCGGCGAGACCTTGAACGCCGAGACCAAC 609950
Query 221539 GGGCCTGTGTCTCCTGTTGGA--AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596
||| | || | | |||| || |||| ||||| || ||||| || |||||||||||
Sbjct 609951 GGGTCGATGACGCATGTTCGAGTTGCGG--GCTTCCGGAACGGGGTAGTAGTTGACGTCG 610008
Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTT 221628
|| | ||||| | |||| |||| ||| ||
Sbjct 610009 ATGACCTTGTTCAAGTTCTTGGTGACGACCTT 610040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928842988752640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |