Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq10 109 1e-18 >seq10 Length=738709 Score = 109 bits (120), Expect = 1e-18 Identities = 381/578 (66%), Gaps = 19/578 (3%) Strand=Plus/Plus Query 221818 ATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAAT 221877 ||| |||||||| ||||| ||||| || ||||| |||||||| ||| || | ||||| Sbjct 610328 ATTCGCAGCGTCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAAT 610387 Query 221878 CTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTG-ACTGCACCCTCGGTCTTTTCAT 221936 || |||||||| | || | | | || || || ||| |||| ||| | Sbjct 610388 AGCGTACCAGAGTTTTTGCGCTTTGATCATCTTCCTGTACTTG-CCCTGCCTCTCGTATG 610446 Query 221937 ACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG 221996 || || ||||| ||| || | |||| | || ||| ||| || |||||| Sbjct 610447 ACTCG-TATAGTTCATCGAAAGCCTTTCCATG-ACAA-TCGGCCAATCCAGGACACTCAT 610503 Query 221997 CGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGA 222056 |||||||||| | ||| | | |||| || | ||||||| || ||||||| Sbjct 610504 GTGGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGA 610563 Query 222057 TCCACAGCGCCTGAAAGAGATCTCTGGTCCG--CTGCTCCTCCACGCCGTTGTTTTTCCT 222114 |||||| ||| | || | ||| | | || || || || || ||| ||||| | Sbjct 610564 TCCACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTAC--CGTGATTTTTTCG 610621 Query 222115 CAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCC 222174 ||||| | ||| || |||| ||| |||||||| ||||| || || | ||| | || || Sbjct 610622 TAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACC 610681 Query 222175 GGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTG-AAGATGCGAAGGG 222233 ||||||||||| ||||| ||||| || | | |||| | ||| | ||||| Sbjct 610682 TGGTCGCTTGTTACCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCT-CGAAGCA 610740 Query 222234 TCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCA 222293 | || || | ||||| || ||||| || || ||||| | ||| ||| | | Sbjct 610741 TAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAA 610800 Query 222294 GGTT---ACTGGCAGACATGCCGATACCACCGGCGTGT-TTCGAGATCATGGCGCAGCTC 222349 ||| | | | || | ||||||||||| || ||| || ||||||||||| || | Sbjct 610801 TGTTGTGAAT-GTTGAGA--CCGATACCACCTGC-TGTCTTGGAGATCATGGCACAAGTT 610856 Query 222350 TTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTT 222387 |||||||| || ||| || || || || |||||||| Sbjct 610857 TTGAGAGTATCATAGATACCTTCGATGGAATCCTCCTT 610894 Score = 91.5 bits (100), Expect = 3e-13 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || |||||||| ||||||||||||||| | ||||||| | ||||| || | Sbjct 609832 AGAGCTGCGTGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCCA 609891 Query 221480 GTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||| |||||||| || | |||| | | ||||| || || || || |||| ||| | Sbjct 609892 TCGAATGGCATACGGAGAGCCATGAATG-CATCGGCGAGACCTTGAACGCCGAGACCAAC 609950 Query 221539 GGGCCTGTGTCTCCTGTTGGA--AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||| | || | | |||| || |||| ||||| || ||||| || ||||||||||| Sbjct 609951 GGGTCGATGACGCATGTTCGAGTTGCGG--GCTTCCGGAACGGGGTAGTAGTTGACGTCG 610008 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTT 221628 || | ||||| | |||| |||| ||| || Sbjct 610009 ATGACCTTGTTCAAGTTCTTGGTGACGACCTT 610040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842988752640