Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 4e-30
seq13 95.1 2e-14
>seq1
Length=1746732
Score = 147 bits (162), Expect = 4e-30
Identities = 174/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || ||||| | | ||| || |||| ||| | ||||| ||| || || ||
Sbjct 1066527 ATTTGCATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTG 1066586
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| | || | | || || | |||||| ||||| ||||| || ||||| |||
Sbjct 1066587 TAGTCGGAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGA 1066646
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|||||||| || ||||| || ||||| || |||| |||| || || |||||||||
Sbjct 1066647 TCAGGAGGGATACCTTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAA 1066706
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| ||||| |||||||| ||||| | || || || || ||||||||
Sbjct 1066707 GACTCGACTTCGAGAGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762
Score = 104 bits (114), Expect = 4e-17
Identities = 111/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|| ||||| ||||| || | | ||| |||||||| || || || || || ||||| ||
Sbjct 1066389 TGCTTTCCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATACCCTCCTTGTCTTGAATC 1066448
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||| ||| | ||| || |||||||||||||| || || | || |||||||| |||
Sbjct 1066449 TTGGATTTCACATTATCGATCGTATCGGAAGACTCTACCTCCAACGTGATAGTTTTCCCT 1066508
Query 193335 GTTAGCGTTTTTACAAATATTTGCATT 193361
|| | ||||| ||||| |||||||||
Sbjct 1066509 GTCAAAGTTTTGACAAAGATTTGCATT 1066535
>seq13
Length=658505
Score = 95.1 bits (104), Expect = 2e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | | || || |||| ||| | |||| ||| || || || || || ||
Sbjct 563808 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 563867
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| || ||| ||| || | || ||||| || || || || |||||||||||||| ||
Sbjct 563868 TAGAGTCCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 563927
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| || || || || || || |||| || | ||| || || ||||||||||||||
Sbjct 563928 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 563987
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAG 193339
|| || || || || |||||||| ||
Sbjct 563988 CTCGAGGGTGATGGTCTTACCTGTAAG 564014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899652645673920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |