Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 2e-15
seq13 93.3 8e-14
>seq1
Length=1746732
Score = 98.7 bits (108), Expect = 2e-15
Identities = 128/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 192361 TAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGA 192420
|||||||| ||||| | |||| || | || || ||||||||||| | | ||| |||
Sbjct 1066359 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 1066418
Query 192421 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGAC 192480
|||||||| || || || || ||||| || || ||| |||||| || | ||| ||
Sbjct 1066419 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGGAA 1066478
Query 192481 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| ||||| || | || || ||||| || || || ||||| | ||| || ||||||
Sbjct 1066479 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535
>seq13
Length=658505
Score = 93.3 bits (102), Expect = 8e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | |||||| | || ||||| | ||||| ||| || ||| || ||||| ||
Sbjct 563808 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 563867
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| || | |||| || | || || ||||| ||||| || |||||||||||||||||
Sbjct 563868 TAGAGTCCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 563927
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| || || || || || || || || ||||| || | || || || || ||
Sbjct 563928 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 563987
Query 192489 TTCTAGAGTAATGGTTTTACCAGT 192512
|| || || ||||| ||||| ||
Sbjct 563988 CTCGAGGGTGATGGTCTTACCTGT 564011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984478032270600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |