Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq10 104 7e-17
>seq10
Length=738709
Score = 104 bits (114), Expect = 7e-17
Identities = 219/320 (68%), Gaps = 14/320 (4%)
Strand=Plus/Plus
Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613
||||| | | ||| | ||| ||||| ||| | || ||||||||||| || || |||
Sbjct 257322 TCATAGCACACCATGACGTCCTCCATCGCCTTCACCAATCGACGCTGAATGTATCCTGTT 257381
Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673
|| || || || || |||||||| | ||| |||||||| |||| || ||||||||
Sbjct 257382 TCAGCGGTCTTGACTGCAGTATCAATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAG 257441
Query 302674 AGCTCTTCCG--GTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| ||||| | ||| | || | ||| | ||| |||||||||| |||| || || |
Sbjct 257442 AACTCTTGTGGAGTC-AAACCTCGCAA-GTACGAGTTCTCAACGAAGCCACCAGCTTCAG 257499
Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791
| || ||| ||| | || || |||| | ||||| || | ||| | |||||||
Sbjct 257500 GTCCATAATCGTCCTTCGAGAAATGGGGCAATGACCTGTGCTTGAACCCGAACGGGATAC 257559
Query 302792 GCTTTCCATCAACGTTCTGCTGTCCCAGGCA---CGAAATCATCTGCGAAATATT--TAA 302846
||||||| || || ||| || || | || ||| ||||||||| || || | |
Sbjct 257560 GCTTTCCTTCCACCGACTGTTGACCAACACAACCCGA---CATCTGCGAGATGTTGATGA 257616
Query 302847 ATCACTGCCCTTGGAGCCAG 302866
|| | |||||||| ||||
Sbjct 257617 ATGA--ACCCTTGGAACCAG 257634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471814658204572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |