Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq10 104 7e-17 >seq10 Length=738709 Score = 104 bits (114), Expect = 7e-17 Identities = 219/320 (68%), Gaps = 14/320 (4%) Strand=Plus/Plus Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613 ||||| | | ||| | ||| ||||| ||| | || ||||||||||| || || ||| Sbjct 257322 TCATAGCACACCATGACGTCCTCCATCGCCTTCACCAATCGACGCTGAATGTATCCTGTT 257381 Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673 || || || || || |||||||| | ||| |||||||| |||| || |||||||| Sbjct 257382 TCAGCGGTCTTGACTGCAGTATCAATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAG 257441 Query 302674 AGCTCTTCCG--GTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731 | ||||| | ||| | || | ||| | ||| |||||||||| |||| || || | Sbjct 257442 AACTCTTGTGGAGTC-AAACCTCGCAA-GTACGAGTTCTCAACGAAGCCACCAGCTTCAG 257499 Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791 | || ||| ||| | || || |||| | ||||| || | ||| | ||||||| Sbjct 257500 GTCCATAATCGTCCTTCGAGAAATGGGGCAATGACCTGTGCTTGAACCCGAACGGGATAC 257559 Query 302792 GCTTTCCATCAACGTTCTGCTGTCCCAGGCA---CGAAATCATCTGCGAAATATT--TAA 302846 ||||||| || || ||| || || | || ||| ||||||||| || || | | Sbjct 257560 GCTTTCCTTCCACCGACTGTTGACCAACACAACCCGA---CATCTGCGAGATGTTGATGA 257616 Query 302847 ATCACTGCCCTTGGAGCCAG 302866 || | |||||||| |||| Sbjct 257617 ATGA--ACCCTTGGAACCAG 257634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814658204572