Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 145 1e-29 >seq1 Length=1746732 Score = 145 bits (160), Expect = 1e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| || || || ||||| || || || || || || || || ||| | | |||| Sbjct 1066548 CGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCG 1066607 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| |||||||| || || || || | || || ||||| ||||| || |||||||| Sbjct 1066608 TCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTG 1066667 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||| | ||||| || || |||||||| || || ||||| | ||| || Sbjct 1066668 TCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATA 1066727 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || |||||||| ||||| || || || ||||| Sbjct 1066728 GTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762 Score = 131 bits (144), Expect = 3e-25 Identities = 135/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 82635 TAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGA 82694 |||||||| | | || || ||||| || || |||||||||||||| || | || ||| Sbjct 1066359 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 1066418 Query 82695 TCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTA 82754 || || || || || ||||| ||||||||||| | ||| ||||| || |||||||| | Sbjct 1066419 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGGAA 1066478 Query 82755 GGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | ||||| ||||| || || || || |||||||| || || ||||| || |||||| Sbjct 1066479 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825237572884