Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 1e-29
>seq1
Length=1746732
Score = 145 bits (160), Expect = 1e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| || || || ||||| || || || || || || || || ||| | | ||||
Sbjct 1066548 CGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCG 1066607
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| |||||||| || || || || | || || ||||| ||||| || ||||||||
Sbjct 1066608 TCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTG 1066667
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||| | ||||| || || |||||||| || || ||||| | ||| ||
Sbjct 1066668 TCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATA 1066727
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || |||||||| ||||| || || || |||||
Sbjct 1066728 GTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762
Score = 131 bits (144), Expect = 3e-25
Identities = 135/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 82635 TAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGA 82694
|||||||| | | || || ||||| || || |||||||||||||| || | || |||
Sbjct 1066359 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 1066418
Query 82695 TCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTA 82754
|| || || || || ||||| ||||||||||| | ||| ||||| || |||||||| |
Sbjct 1066419 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGGAA 1066478
Query 82755 GGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| ||||| ||||| || || || || |||||||| || || ||||| || ||||||
Sbjct 1066479 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981825237572884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |