Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 seq13 86.0 6e-12 seq10 86.0 6e-12 >seq1 Length=1746732 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | || ||||| || || || ||||| ||| | || |||| ||| |||| Sbjct 1066557 AAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGT--ACGACCGTCTTCGA 1066614 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| |||| | || |||||| || |||||||| ||||||||||| | Sbjct 1066615 GTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGAA 1066674 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||| | | || | ||| |||| | ||| || |||| |||| ||||| | Sbjct 1066675 TCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATAGTTTTCC 1066734 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| ||| || ||||| || ||||| Sbjct 1066735 CTGTCAAAGTCTTGACGAAGATTTGCAT 1066762 >seq13 Length=658505 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/188 (71%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512 ||||| | || ||||| ||||| || |||||||| | || | | | | ||||||| Sbjct 563830 AAATGAAGAGTAGACTCCTTCTGGATGTTGTAATC--CGATAGAGTCCTACCATCCTCGA 563887 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||||| || ||| | || | || ||| || || || ||||| || |||||||| || Sbjct 563888 GCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGGA 563947 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||||| | || | ||||||| | ||| || |||| ||||| ||| || | Sbjct 563948 TCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTAC 564007 Query 133633 CGGTCAGA 133640 | || ||| Sbjct 564008 CTGTAAGA 564015 >seq10 Length=738709 Score = 86.0 bits (94), Expect = 6e-12 Identities = 427/672 (64%), Gaps = 6/672 (1%) Strand=Plus/Plus Query 148263 ACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCA 148322 || || || ||||| || |||||||| || || ||| | |||||| || | || || Sbjct 609541 ACGACTTGGAACTCTCCAGCGAGCACACGACGAGTATAGATGTTGCTGGTGTAAGGCTCG 609600 Query 148323 AACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGC 148382 || |||| || |||| ||||| | |||| || || ||||| ||| ||||| Sbjct 609601 AAGCACTCATTCCATCCCAGGATCTGAGAAGTCGACGCGGTAGGCATCGGCGCGACCAGG 609660 Query 148383 AGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGC 148442 || ||||| | || |||| | || || ||| ||| |||| || |||||||||||| Sbjct 609661 AGGGAGTTTCTCAGACCGTGTTTGGCGATGTTGGCCTTGAGAGTCGACCAGTCCCAGAGT 609720 Query 148443 GGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCC 148502 | | ||| || | ||||| |||| | ||||| |||| ||| || || || Sbjct 609721 GAGGTCGGGGTAATACCCCACAGGTCGAATTGCAGCCTGCCCTCGCTGGCAGGAGATCCT 609780 Query 148503 TCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCG 148562 ||| | ||| | || | | | || || ||||| | || || || || Sbjct 609781 GGGTAAGTCAGGTAGTGACCCTCAATCTCAGCAAGCTCGCAAGAAGATTCAAGAGCTGCG 609840 Query 148563 TAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGC 148622 | |||||| ||||| || | |||||| | ||| || ||| | ||| Sbjct 609841 TGGTAAATGGTCTCAAAGATCTTGAGGTTGAGTTCCCGGGCCTGAGGGCCATCGAATGGC 609900 Query 148623 ATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGT 148682 ||||| || || || || ||||| || || || ||||| | |||| ||| || || Sbjct 609901 ATACGGAGAGCCATGAATGCATCGGCGAGACCTTGAACGCCGAGACCAACGGGTCGATGA 609960 Query 148683 TTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTG-T 148740 ||||| ||| ||| || || || | || |||| |||| |||||||| |||| | Sbjct 609961 CGCATGTTCGAGTTGCGGGC-TTCCGGAACGGGGTAGTAGTTGACGTCGATGACCTTGTT 610019 Query 148741 CAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCAT 148800 |||| || || ||||| |||| ||| | | || ||||||| | | Sbjct 610020 CAAG-TTCTTGGTGACGACCTTGGTAACGTCATGCAACTTCTGGAAGTCGTACTCTCCGT 610078 Query 148801 CTACGATGCAT-CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGG 148859 |||| || ||| | | ||||| || || | ||||| || || ||||||||| Sbjct 610079 TCGTGATGAATGCGGGT-AGGGCGAGCGAAGCCAAGTTGCAAACTGCGACCTCATCCGGA 610137 Query 148860 GCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTT 148919 || | |||| | |||||||| |||| ||| | |||||| || | ||||| | Sbjct 610138 GCAGAGAACTCGATGATCTCGGTACACAAGTTGGAAGACTTGATCGTTCCGAGGTTCTGT 610197 Query 148920 TGATTGCTCTTG 148931 || ||| |||| Sbjct 610198 TGGTTGGACTTG 610209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419857329440