Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq10 104 6e-17
seq12 98.7 2e-15
>seq10
Length=738709
Score = 104 bits (114), Expect = 6e-17
Identities = 347/537 (65%), Gaps = 5/537 (1%)
Strand=Plus/Minus
Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597
|| || || ||||| || |||||||| |||||| |||| ||| ||| | || ||
Sbjct 610897 ATGAAGGAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCC 610838
Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657
|| | | || || || ||| | || |||| | ||||| | || || | | |||
Sbjct 610837 AAGACAGCAGGTGGTATCGGTCTCAACATTCACAACATTCGTGCCAAGGGTTCTTACATC 610778
Query 110658 GCAACAGCGAA-GGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACAC 110716
|| | || |||| || ||| | | | ||||| ||| | ||| | | ||| ||
Sbjct 610777 GCTGGTACAAACGGGTACTCGAACGGTA-TCGTTCCTATGCTTCGAGCTTACGACGCAAC 610719
Query 110717 TGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGA 110773
|| || || ||||||||||||| | || || | ||||| || || |||||
Sbjct 610718 CGCTCGTTACGTCGATCAAGGTGGTAACAAGCGACCAGGTGCCTTTGCCATTTACCTCGA 610659
Query 110774 ACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGA 110833
|| ||||| | || | || || || | || || || |||||||| || |||||
Sbjct 610658 GCCATGGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGAAGA 610599
Query 110834 ACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893
| |||| ||||||||||| || || ||||||| | ||| | |||||| |||||
Sbjct 610598 AGTTCGAGCTCGTGATTTATTCTACGCGTTGTGGATCCCGGATCTTTTCATGCGTCGTGT 610539
Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953
|||| |||| |||| || | |||||||| ||| | |||||| | | |||
Sbjct 610538 AGAAGAGGATGGAGAGTGGGCTTTGATGTGTCCACATGAGTGTCCTGGATTGGCCGATTG 610479
Query 110954 ATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA 111013
||||||| | || || || || ||||| ||| || | | ||||||| | ||
Sbjct 610478 TCATGGAAAGGCTTTCGATGAACTATACGAGTCATACGAGAGGCAGGGCAAGTACAGGAA 610419
Query 111014 ACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGG 111070
|| ||| ||| |||| |||| | || || ||| |||| ||| |||||
Sbjct 610418 GATGATCAAAGCGCAAAAACTCTGGTACGCTATTCTCGAAGCACAGACTGAGACTGG 610362
>seq12
Length=685287
Score = 98.7 bits (108), Expect = 2e-15
Identities = 180/261 (69%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 279875 GATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTA 279934
|| || ||||||||| ||||| ||| | ||||| |||| ||||| || ||| | |||
Sbjct 584605 GACGGCTTGAAACCTGGCCAGCGCAAGGTCCTATTCGGTTGCTTCAAGAGGAAACTTGTA 584664
Query 279935 AAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCAC 279994
||||| || ||||| || | || ||||| ||||| || | | ||| ||||||
Sbjct 584665 AAGGAGATCAAAGTTGCGCAACTTGCCGGTTACGTTTCTGAGAAGACTTCTTACCATCAC 584724
Query 279995 GGTGAAGCGTCTCTTCAAGGTG-CTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAAA 280053
|| ||| | | || | || |||| || ||||| || ||| ||| ||| ||
Sbjct 584725 GGCGAACAGAGT-TTGACCATGACTATCGTCGGTCTCGCTCAAACCTTTGTGGGAAGCAA 584783
Query 280054 CAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTATTCACAATGGAAAAGA 280113
|||| | || |||| || || |||||||| ||| ||||| ||| ||||||||
Sbjct 584784 CAACATCAACTTGCTCGACCCCAACGGTCAATTCGGTACTCGTGCTCAGGGAGGAAAAGA 584843
Query 280114 TCATGGTAGTGCTCGTTACAT 280134
|| |||||||||||||||
Sbjct 584844 CGCTGCTAGTGCTCGTTACAT 584864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186810427857916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |