Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq10 104 6e-17 seq12 98.7 2e-15 >seq10 Length=738709 Score = 104 bits (114), Expect = 6e-17 Identities = 347/537 (65%), Gaps = 5/537 (1%) Strand=Plus/Minus Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597 || || || ||||| || |||||||| |||||| |||| ||| ||| | || || Sbjct 610897 ATGAAGGAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCC 610838 Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657 || | | || || || ||| | || |||| | ||||| | || || | | ||| Sbjct 610837 AAGACAGCAGGTGGTATCGGTCTCAACATTCACAACATTCGTGCCAAGGGTTCTTACATC 610778 Query 110658 GCAACAGCGAA-GGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACAC 110716 || | || |||| || ||| | | | ||||| ||| | ||| | | ||| || Sbjct 610777 GCTGGTACAAACGGGTACTCGAACGGTA-TCGTTCCTATGCTTCGAGCTTACGACGCAAC 610719 Query 110717 TGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGA 110773 || || || ||||||||||||| | || || | ||||| || || ||||| Sbjct 610718 CGCTCGTTACGTCGATCAAGGTGGTAACAAGCGACCAGGTGCCTTTGCCATTTACCTCGA 610659 Query 110774 ACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGA 110833 || ||||| | || | || || || | || || || |||||||| || ||||| Sbjct 610658 GCCATGGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGAAGA 610599 Query 110834 ACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893 | |||| ||||||||||| || || ||||||| | ||| | |||||| ||||| Sbjct 610598 AGTTCGAGCTCGTGATTTATTCTACGCGTTGTGGATCCCGGATCTTTTCATGCGTCGTGT 610539 Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953 |||| |||| |||| || | |||||||| ||| | |||||| | | ||| Sbjct 610538 AGAAGAGGATGGAGAGTGGGCTTTGATGTGTCCACATGAGTGTCCTGGATTGGCCGATTG 610479 Query 110954 ATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA 111013 ||||||| | || || || || ||||| ||| || | | ||||||| | || Sbjct 610478 TCATGGAAAGGCTTTCGATGAACTATACGAGTCATACGAGAGGCAGGGCAAGTACAGGAA 610419 Query 111014 ACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGG 111070 || ||| ||| |||| |||| | || || ||| |||| ||| ||||| Sbjct 610418 GATGATCAAAGCGCAAAAACTCTGGTACGCTATTCTCGAAGCACAGACTGAGACTGG 610362 >seq12 Length=685287 Score = 98.7 bits (108), Expect = 2e-15 Identities = 180/261 (69%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 279875 GATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTA 279934 || || ||||||||| ||||| ||| | ||||| |||| ||||| || ||| | ||| Sbjct 584605 GACGGCTTGAAACCTGGCCAGCGCAAGGTCCTATTCGGTTGCTTCAAGAGGAAACTTGTA 584664 Query 279935 AAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCAC 279994 ||||| || ||||| || | || ||||| ||||| || | | ||| |||||| Sbjct 584665 AAGGAGATCAAAGTTGCGCAACTTGCCGGTTACGTTTCTGAGAAGACTTCTTACCATCAC 584724 Query 279995 GGTGAAGCGTCTCTTCAAGGTG-CTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAAA 280053 || ||| | | || | || |||| || ||||| || ||| ||| ||| || Sbjct 584725 GGCGAACAGAGT-TTGACCATGACTATCGTCGGTCTCGCTCAAACCTTTGTGGGAAGCAA 584783 Query 280054 CAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTATTCACAATGGAAAAGA 280113 |||| | || |||| || || |||||||| ||| ||||| ||| |||||||| Sbjct 584784 CAACATCAACTTGCTCGACCCCAACGGTCAATTCGGTACTCGTGCTCAGGGAGGAAAAGA 584843 Query 280114 TCATGGTAGTGCTCGTTACAT 280134 || ||||||||||||||| Sbjct 584844 CGCTGCTAGTGCTCGTTACAT 584864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186810427857916