Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 1e-12 seq1 89.7 1e-12 >seq13 Length=658505 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 206191 CTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAG 206250 || ||||| || || ||||| | || || || ||| ||||| |||| || ||| Sbjct 564014 CTTACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAG 563955 Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310 ||||| || || || || || || || || || || | |||||||| ||| Sbjct 563954 TCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGGA 563895 Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370 |||||| | || ||||| |||||| | | ||||||||| ||||||| |||||||||||| Sbjct 563894 AAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCTT 563835 Query 206371 CA 206372 || Sbjct 563834 CA 563833 >seq1 Length=1746732 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| ||||| |||||| | ||||| || ||| || || |||| |||||| Sbjct 1066738 ACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCCGATACGATCGATAACGTAAAGTCC 1066679 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| || || || || || | || |||||||| || Sbjct 1066678 AAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAGCAGAGGTTGATTTTCGCCGGTAAA 1066619 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | ||||| || | ||| | |||| |||||| |||| || |||||||| ||||| Sbjct 1066618 CAACTCGAAGACGGTCGTACTCTCTCCGACTACAACATCCAAAAGGAGTCTACACTTCAT 1066559 Query 206374 CTTGTTTTGAGACTTCG 206390 | ||| | ||||||| Sbjct 1066558 TTGGTTCTCCGACTTCG 1066542 Score = 86.0 bits (94), Expect = 1e-11 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| |||||| | ||||| ||||| ||||| ||||| || || ||| || Sbjct 1066531 CAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTCCGAT 1066472 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || || ||||||||||| || || || ||| || || || Sbjct 1066471 ACGATCGATAATGTGAAATCCAAGATTCAAGACAAGGAGGGTATTCCACCTGATCAGCAG 1066412 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACA 206347 | |||||||| || ||||||||| | |||||||| ||||| ||| | ||||||| Sbjct 1066411 CGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACATTGTCTGATTACA 1066357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818437835676