Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq13 89.7 1e-12
seq1 89.7 1e-12
>seq13
Length=658505
Score = 89.7 bits (98), Expect = 1e-12
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 206191 CTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAG 206250
|| ||||| || || ||||| | || || || ||| ||||| |||| || |||
Sbjct 564014 CTTACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAG 563955
Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310
||||| || || || || || || || || || || | |||||||| |||
Sbjct 563954 TCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGGA 563895
Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370
|||||| | || ||||| |||||| | | ||||||||| ||||||| ||||||||||||
Sbjct 563894 AAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCTT 563835
Query 206371 CA 206372
||
Sbjct 563834 CA 563833
>seq1
Length=1746732
Score = 89.7 bits (98), Expect = 1e-12
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
||||| ||||| |||||| | ||||| || ||| || || |||| ||||||
Sbjct 1066738 ACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCCGATACGATCGATAACGTAAAGTCC 1066679
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| || || || || || | || |||||||| ||
Sbjct 1066678 AAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAGCAGAGGTTGATTTTCGCCGGTAAA 1066619
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| | ||||| || | ||| | |||| |||||| |||| || |||||||| |||||
Sbjct 1066618 CAACTCGAAGACGGTCGTACTCTCTCCGACTACAACATCCAAAAGGAGTCTACACTTCAT 1066559
Query 206374 CTTGTTTTGAGACTTCG 206390
| ||| | |||||||
Sbjct 1066558 TTGGTTCTCCGACTTCG 1066542
Score = 86.0 bits (94), Expect = 1e-11
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| |||||| | ||||| ||||| ||||| ||||| || || ||| ||
Sbjct 1066531 CAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTCCGAT 1066472
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || || ||||||||||| || || || ||| || || ||
Sbjct 1066471 ACGATCGATAATGTGAAATCCAAGATTCAAGACAAGGAGGGTATTCCACCTGATCAGCAG 1066412
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACA 206347
| |||||||| || ||||||||| | |||||||| ||||| ||| | |||||||
Sbjct 1066411 CGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACATTGTCTGATTACA 1066357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181818437835676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |