Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq10 91.5 1e-13 >seq1 Length=1746732 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | ||||| || ||||| || ||||||||| | | || |||||||| Sbjct 1066554 ACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCG 1066613 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||||||| |||| | | ||| ||||| || || | ||| || || || Sbjct 1066614 AGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGA 1066673 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | | || | || || | | || ||||| ||||| |||| ||| Sbjct 1066674 ATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATAGTTTTC 1066733 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| || || |||||||||||| Sbjct 1066734 CCTGTCAAAGTCTTGACGAAGATTTGCATA 1066763 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||||||||| || || || | || |||||||| ||||| || || | |||||| || Sbjct 1066380 TCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATACCCTCCTTG 1066439 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| ||||| | || | || || | | || || || | || ||| Sbjct 1066440 TCTTGAATCTTGGATTTCACATTATCGATCGTATCGGAAGACTCTACCTCCAACGTGATA 1066499 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| || |||| |||||| |||||||||||||| Sbjct 1066500 GTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCAT 1066534 >seq10 Length=738709 Score = 91.5 bits (100), Expect = 1e-13 Identities = 247/375 (66%), Gaps = 5/375 (1%) Strand=Plus/Plus Query 131615 GGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACC 131674 |||||||| | | |||| | || | || ||| || || ||| || | |||||| | | Sbjct 610506 GGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATC 610565 Query 131675 CATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAA 131734 || |||||||| || | ||| | |||| |||||| |||| | ||||| | | Sbjct 610566 CACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGA 610625 Query 131735 TTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTG 131794 | | |||||| |||| ||| || ||||| || || | || | || | || ||| Sbjct 610626 TCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTGGT 610685 Query 131795 CGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGC 131851 ||||| ||| ||||||| || | |||| | | || ||| | || | ||| || Sbjct 610686 CGCTTGTTACCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGA 610745 Query 131852 TCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTG 131911 | | |||||| | || || || || | ||||| || ||||| | || ||| Sbjct 610746 ACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTG 610805 Query 131912 TGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGT 131970 |||| |||||| || ||||| || || || || ||||| | || || | | ||||| Sbjct 610806 TGAATGTTGAGACCGATACCACCTGCTGTCTTG-GAGATCATGGCACAAGTTTTGAGAGT 610864 Query 131971 GTTATAGATACCTTC 131985 | |||||||||||| Sbjct 610865 ATCATAGATACCTTC 610879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933592093472