Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 5e-19
seq10 91.5 1e-13
>seq1
Length=1746732
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||||||| | ||||| || ||||| || ||||||||| | | || ||||||||
Sbjct 1066554 ACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCG 1066613
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|| |||||||||||| |||| | | ||| ||||| || || | ||| || || ||
Sbjct 1066614 AGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCCTTGTCTTGA 1066673
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| || | | | || | || || | | || ||||| ||||| |||| |||
Sbjct 1066674 ATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTGATAGTTTTC 1066733
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||| ||| || || ||||||||||||
Sbjct 1066734 CCTGTCAAAGTCTTGACGAAGATTTGCATA 1066763
Score = 82.4 bits (90), Expect = 6e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||||||||| || || || | || |||||||| ||||| || || | |||||| ||
Sbjct 1066380 TCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATACCCTCCTTG 1066439
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| |||||| ||||| | || | || || | | || || || | || |||
Sbjct 1066440 TCTTGAATCTTGGATTTCACATTATCGATCGTATCGGAAGACTCTACCTCCAACGTGATA 1066499
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||| || |||| |||||| ||||||||||||||
Sbjct 1066500 GTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCAT 1066534
>seq10
Length=738709
Score = 91.5 bits (100), Expect = 1e-13
Identities = 247/375 (66%), Gaps = 5/375 (1%)
Strand=Plus/Plus
Query 131615 GGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACC 131674
|||||||| | | |||| | || | || ||| || || ||| || | |||||| | |
Sbjct 610506 GGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATC 610565
Query 131675 CATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAA 131734
|| |||||||| || | ||| | |||| |||||| |||| | ||||| | |
Sbjct 610566 CACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGA 610625
Query 131735 TTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTG 131794
| | |||||| |||| ||| || ||||| || || | || | || | || |||
Sbjct 610626 TCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTGGT 610685
Query 131795 CGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGC 131851
||||| ||| ||||||| || | |||| | | || ||| | || | ||| ||
Sbjct 610686 CGCTTGTTACCACCTTGATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGA 610745
Query 131852 TCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTG 131911
| | |||||| | || || || || | ||||| || ||||| | || |||
Sbjct 610746 ACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTG 610805
Query 131912 TGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGT 131970
|||| |||||| || ||||| || || || || ||||| | || || | | |||||
Sbjct 610806 TGAATGTTGAGACCGATACCACCTGCTGTCTTG-GAGATCATGGCACAAGTTTTGAGAGT 610864
Query 131971 GTTATAGATACCTTC 131985
| ||||||||||||
Sbjct 610865 ATCATAGATACCTTC 610879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933592093472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |