Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2 223 1e-52 seq1 136 1e-26 seq13 104 7e-17 seq12 86.0 2e-11 >seq2 Length=1129421 Score = 223 bits (246), Expect = 1e-52 Identities = 668/1027 (65%), Gaps = 8/1027 (1%) Strand=Plus/Plus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 ||||| || | || || |||||||| || || || | |||||| || || || ||| Sbjct 510300 GATGCCGTCGTCACCGTCCCAGCCTACTTCAACGACTCTCAGCGTCAAGCTACCAAGGAT 510359 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || || || || || | ||||| || |||| || || || || ||||| || || Sbjct 510360 GCCGGTTTGATCGCTGGTCTCAATGTCCTCCGAATCATCAACGAGCCAACTGCCGCTGCC 510419 Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCAAG--aaaaaaaTATTCTTATTTTTGATT 349784 || ||||| || || || || | ||| || | | || || |||| || || || | Sbjct 510420 ATCGCATACGGACTCGACAAGA--AGTCCGCAGGTGAGAAGAACGTTCTCATCTTCGACT 510477 Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTA 349844 | || ||||||||||| |||||||| || || || | || ||||| || || || || | Sbjct 510478 TGGGAGGTGGTACTTTCGATGTATCTCTCCTTACTATCGAGGAGGGTATCTTCGAGGTCA 510537 Query 349845 AAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGC 349904 | || || || ||||| || ||| | ||||| ||||| || || || |||||||| | Sbjct 510538 AGGCCACCGCCGGTGACACCCATTTGGGTGGTGAAGACTTCGACAACCGTCTCGTCAACC 510597 Query 349905 ATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAA 349964 | |||||| | || || ||| | | || | ||| || | || || | || Sbjct 510598 ACTTTGTTCAGGAGTTCAAGAGGAAGAACAAGAAGGATCTTTCATCCAACGCTCGTGCTC 510657 Query 349965 TGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAA 350024 | ||||| || |||| |||||||||||||| ||||| || | || || | | || | Sbjct 510658 TCCGTCGTCTCCGAACCGCGTGTGAACGTGCCAAGCGAACCCTCTCTTCCGCCGCGCAGA 510717 Query 350025 CCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCA--TCTATTACACG 350082 |||| || || ||||| || || ||| || | || ||||| || || || || || Sbjct 510718 CCTCGATCGAGATTGACTCCCTCTTTGACGGTATCGA--TCTTTACACCTCGATCACCCG 510775 Query 350083 TGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAA 350142 |||||| || || || | || ||| || || || | || ||||| || || || || Sbjct 510776 TGCTCGATTCGAGGAGCTCTGCCAGGACCTCTTCCGATCGACCATGGACCCGGTCGAGAA 510835 Query 350143 AGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGG 350202 || | ||||| ||||||| ||| | | || | || | || ||||| Sbjct 510836 GGTTCTCAAAGACTCAAAAATCGACAAGGCTTCCGTCAGCGAGATCGTCCTCGTCGGTGG 510895 Query 350203 TTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACC 350262 ||| || ||||| |||||| ||||| || | |||| || | || || ||||| Sbjct 510896 TTCCACTCGTATCCCAAAAATTCAAAAGCTCGTATCCGACATGTTCTCCGGTCGTGAACC 510955 Query 350263 TTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322 | || || || || |||||||| || ||||| |||||||||||||| || |||| Sbjct 510956 AAACCGTTCGATCAACCCCGATGAAGCCGTCGCATACGGTGCTGCTGTTCAAGCCGCTAT 511015 Query 350323 TTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACT 350382 | | || | | || || | | ||||| | | || || || |||| || Sbjct 511016 CCTCACCGGTGACACCTCGTCAAAGACCCAGGATCTCCTCTTGCTCGACGTCGCTCCTCT 511075 Query 350383 TTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTAC 350442 || || | || || |||||| || ||||| || || |||| | || Sbjct 511076 CTCTACCGGTATCGAGACCGCTGGTGGTGTCATGACCCCGCTCATCAAGCGAAACACCAC 511135 Query 350443 TGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAAC 350502 || ||||| ||||||||| ||| || || || | | || || ||||||| || Sbjct 511136 CGTTCCTACCAAAAAGTCCGAAATCTTCTCCACCTACTCGGACAACCAGCCAGGTGTGCT 511195 Query 350503 AATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATT 350562 || || || | ||| ||||||||||| || || || ||| || || ||| | || Sbjct 511196 CATCCAGGTCTATGAGGGTGAACGTGCACGAACCAAGGATTGCAACCTCCTCGGAAAGTT 511255 Query 350563 TACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622 || | | |||||||| ||| | || || || || || |||||| | ||||| Sbjct 511256 CGAGCTCACCGGTATTCCACCCGCTCCTCGTGGTGTCCCCCAAATCGAAGTCACCTTCGA 511315 Query 350623 TATTGAT 350629 ||| ||| Sbjct 511316 TATCGAT 511322 >seq1 Length=1746732 Score = 136 bits (150), Expect = 1e-26 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||| | || ||||| | |||||| |||||||| ||||| || || | Sbjct 1066528 TTTGCATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGT 1066587 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || ||||| |||||||| || || || || | | ||||||| Sbjct 1066588 AGTCGGAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGAT 1066647 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || ||||| || || ||||| || | ||||| ||||| |||| ||| || | Sbjct 1066648 CAGGAGGGATACCTTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAG 1066707 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || | || || || || | || || || || || ||||| Sbjct 1066708 ACTCGACTTCGAGAGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762 Score = 131 bits (144), Expect = 5e-25 Identities = 135/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 |||||||| ||||| | |||||||| || || |||||||||||||| ||||| |||||| Sbjct 1066359 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 1066418 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 ||||| ||||| || || || || ||||| || | ||| |||||||| |||| ||| || Sbjct 1066419 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGGAA 1066478 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || | || | || || || || | ||||| ||||| || |||||| Sbjct 1066479 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535 >seq13 Length=658505 Score = 104 bits (114), Expect = 7e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | ||||||||||||||| || || || || ||||| || Sbjct 563808 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 563867 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || || | ||||| || || || |||||||| ||||| | | || |||||||| || Sbjct 563868 TAGAGTCCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 563927 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || || ||||| || || | || ||||| || || | || || | ||||| Sbjct 563928 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 563987 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAG 140716 || || || | ||||| || || || Sbjct 563988 CTCGAGGGTGATGGTCTTACCTGTAAG 564014 >seq12 Length=685287 Score = 86.0 bits (94), Expect = 2e-11 Identities = 183/273 (67%), Gaps = 8/273 (3%) Strand=Plus/Minus Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || |||||||| || || || | |||||| || || || || ||||| |||||| Sbjct 602455 GTCCCAGCCTACTTCAACGACTCTCAGCGTCTCGCTACCAAGGACGCTGGTGCCATTGCC 602396 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | | ||||| | || || ||||| ||||| ||||| || || || || || || Sbjct 602395 GGTCTCGACGTTCTCCGTATCATCAATGAGCCCACCGCTGCTGCCATCGCCTACGGTCTC 602336 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 || | | || | | || || | | | || ||||| ||| | || ||||||||||| Sbjct 602335 GACACCAAGACCAAGGAGGAGAAGATTGTGCTCATTTTCGATCTCGGAGGTGGTACTTTC 602276 Query 349802 GATGTATCACTACT----AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||||| || || || | |||| | || |||| | || || || || ||||| Sbjct 602275 GATGTCTCCCTTCTTTCCATCACT----GGTGGCGTTTTCGCTGTCAAGGCTACCGCTGG 602220 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 ||| || ||| | ||||| || || || || || Sbjct 602219 TGACACCCATTTGGGTGGTGAGGACTTCGACAA 602187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515251371385268