Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq2 223 1e-52
seq1 136 1e-26
seq13 104 7e-17
seq12 86.0 2e-11
>seq2
Length=1129421
Score = 223 bits (246), Expect = 1e-52
Identities = 668/1027 (65%), Gaps = 8/1027 (1%)
Strand=Plus/Plus
Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666
||||| || | || || |||||||| || || || | |||||| || || || |||
Sbjct 510300 GATGCCGTCGTCACCGTCCCAGCCTACTTCAACGACTCTCAGCGTCAAGCTACCAAGGAT 510359
Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726
|| || || || || | ||||| || |||| || || || || ||||| || ||
Sbjct 510360 GCCGGTTTGATCGCTGGTCTCAATGTCCTCCGAATCATCAACGAGCCAACTGCCGCTGCC 510419
Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCAAG--aaaaaaaTATTCTTATTTTTGATT 349784
|| ||||| || || || || | ||| || | | || || |||| || || || |
Sbjct 510420 ATCGCATACGGACTCGACAAGA--AGTCCGCAGGTGAGAAGAACGTTCTCATCTTCGACT 510477
Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTA 349844
| || ||||||||||| |||||||| || || || | || ||||| || || || || |
Sbjct 510478 TGGGAGGTGGTACTTTCGATGTATCTCTCCTTACTATCGAGGAGGGTATCTTCGAGGTCA 510537
Query 349845 AAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGC 349904
| || || || ||||| || ||| | ||||| ||||| || || || |||||||| |
Sbjct 510538 AGGCCACCGCCGGTGACACCCATTTGGGTGGTGAAGACTTCGACAACCGTCTCGTCAACC 510597
Query 349905 ATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAA 349964
| |||||| | || || ||| | | || | ||| || | || || | ||
Sbjct 510598 ACTTTGTTCAGGAGTTCAAGAGGAAGAACAAGAAGGATCTTTCATCCAACGCTCGTGCTC 510657
Query 349965 TGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAA 350024
| ||||| || |||| |||||||||||||| ||||| || | || || | | || |
Sbjct 510658 TCCGTCGTCTCCGAACCGCGTGTGAACGTGCCAAGCGAACCCTCTCTTCCGCCGCGCAGA 510717
Query 350025 CCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCA--TCTATTACACG 350082
|||| || || ||||| || || ||| || | || ||||| || || || || ||
Sbjct 510718 CCTCGATCGAGATTGACTCCCTCTTTGACGGTATCGA--TCTTTACACCTCGATCACCCG 510775
Query 350083 TGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAA 350142
|||||| || || || | || ||| || || || | || ||||| || || || ||
Sbjct 510776 TGCTCGATTCGAGGAGCTCTGCCAGGACCTCTTCCGATCGACCATGGACCCGGTCGAGAA 510835
Query 350143 AGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGG 350202
|| | ||||| ||||||| ||| | | || | || | || |||||
Sbjct 510836 GGTTCTCAAAGACTCAAAAATCGACAAGGCTTCCGTCAGCGAGATCGTCCTCGTCGGTGG 510895
Query 350203 TTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACC 350262
||| || ||||| |||||| ||||| || | |||| || | || || |||||
Sbjct 510896 TTCCACTCGTATCCCAAAAATTCAAAAGCTCGTATCCGACATGTTCTCCGGTCGTGAACC 510955
Query 350263 TTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322
| || || || || |||||||| || ||||| |||||||||||||| || ||||
Sbjct 510956 AAACCGTTCGATCAACCCCGATGAAGCCGTCGCATACGGTGCTGCTGTTCAAGCCGCTAT 511015
Query 350323 TTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACT 350382
| | || | | || || | | ||||| | | || || || |||| ||
Sbjct 511016 CCTCACCGGTGACACCTCGTCAAAGACCCAGGATCTCCTCTTGCTCGACGTCGCTCCTCT 511075
Query 350383 TTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTAC 350442
|| || | || || |||||| || ||||| || || |||| | ||
Sbjct 511076 CTCTACCGGTATCGAGACCGCTGGTGGTGTCATGACCCCGCTCATCAAGCGAAACACCAC 511135
Query 350443 TGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAAC 350502
|| ||||| ||||||||| ||| || || || | | || || ||||||| ||
Sbjct 511136 CGTTCCTACCAAAAAGTCCGAAATCTTCTCCACCTACTCGGACAACCAGCCAGGTGTGCT 511195
Query 350503 AATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATT 350562
|| || || | ||| ||||||||||| || || || ||| || || ||| | ||
Sbjct 511196 CATCCAGGTCTATGAGGGTGAACGTGCACGAACCAAGGATTGCAACCTCCTCGGAAAGTT 511255
Query 350563 TACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622
|| | | |||||||| ||| | || || || || || |||||| | |||||
Sbjct 511256 CGAGCTCACCGGTATTCCACCCGCTCCTCGTGGTGTCCCCCAAATCGAAGTCACCTTCGA 511315
Query 350623 TATTGAT 350629
||| |||
Sbjct 511316 TATCGAT 511322
>seq1
Length=1746732
Score = 136 bits (150), Expect = 1e-26
Identities = 171/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| |||||||| | || ||||| | |||||| |||||||| ||||| || || |
Sbjct 1066528 TTTGCATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGT 1066587
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || || ||||| |||||||| || || || || | | |||||||
Sbjct 1066588 AGTCGGAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGAT 1066647
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
||||||| || ||||| || || ||||| || | ||||| ||||| |||| ||| || |
Sbjct 1066648 CAGGAGGGATACCTTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAG 1066707
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || || | || || || || | || || || || || |||||
Sbjct 1066708 ACTCGACTTCGAGAGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762
Score = 131 bits (144), Expect = 5e-25
Identities = 135/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621
|||||||| ||||| | |||||||| || || |||||||||||||| ||||| ||||||
Sbjct 1066359 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 1066418
Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681
||||| ||||| || || || || ||||| || | ||| |||||||| |||| ||| ||
Sbjct 1066419 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGGAA 1066478
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
| || || || | || | || || || || | ||||| ||||| || ||||||
Sbjct 1066479 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535
>seq13
Length=658505
Score = 104 bits (114), Expect = 7e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || | ||||||||||||||| || || || || ||||| ||
Sbjct 563808 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 563867
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
|| || | ||||| || || || |||||||| ||||| | | || |||||||| ||
Sbjct 563868 TAGAGTCCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 563927
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|| || || || ||||| || || | || ||||| || || | || || | |||||
Sbjct 563928 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 563987
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAG 140716
|| || || | ||||| || || ||
Sbjct 563988 CTCGAGGGTGATGGTCTTACCTGTAAG 564014
>seq12
Length=685287
Score = 86.0 bits (94), Expect = 2e-11
Identities = 183/273 (67%), Gaps = 8/273 (3%)
Strand=Plus/Minus
Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681
|| |||||||| || || || | |||||| || || || || ||||| ||||||
Sbjct 602455 GTCCCAGCCTACTTCAACGACTCTCAGCGTCTCGCTACCAAGGACGCTGGTGCCATTGCC 602396
Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741
|| | | ||||| | || || ||||| ||||| ||||| || || || || || ||
Sbjct 602395 GGTCTCGACGTTCTCCGTATCATCAATGAGCCCACCGCTGCTGCCATCGCCTACGGTCTC 602336
Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801
|| | | || | | || || | | | || ||||| ||| | || |||||||||||
Sbjct 602335 GACACCAAGACCAAGGAGGAGAAGATTGTGCTCATTTTCGATCTCGGAGGTGGTACTTTC 602276
Query 349802 GATGTATCACTACT----AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857
||||| || || || | |||| | || |||| | || || || || |||||
Sbjct 602275 GATGTCTCCCTTCTTTCCATCACT----GGTGGCGTTTTCGCTGTCAAGGCTACCGCTGG 602220
Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAA 349890
||| || ||| | ||||| || || || || ||
Sbjct 602219 TGACACCCATTTGGGTGGTGAGGACTTCGACAA 602187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515251371385268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |