Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 8e-16 >seq8 Length=789079 Score = 98.7 bits (108), Expect = 8e-16 Identities = 235/349 (67%), Gaps = 16/349 (5%) Strand=Plus/Minus Query 112021 TGGTCTATCCCTTTACCAGTATAATCCGCCTGACA--TCCAGTGTATGTTGCCCCATAGT 112078 || || | |||||| || ||||||| | | ||| ||| | || ||| || | | Sbjct 612097 TGATCCACCCCTTTCCCTCTATAATCATCATCACAAGTCCCAT--ATTCTGCTCCGAAAT 612040 Query 112079 GTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCCCGGGGCTGTATCTGGAAATTGCT 112138 |||||||||| |||||||||| || || ||||| || | | ||||| ||| Sbjct 612039 GTCTCCATTGAAATCCATAAACTGGTCCAAGATCACCTTGTCTTCTATCTTTCAATCCAA 611980 Query 112139 CTCTATTCAACAAATCACTTCTAATATGAGGATTCCAAATCTTCACTCCTTTA---GATG 112195 || ||| ||| | || || || || || ||||||| | |||| | ||| Sbjct 611979 CTTTATCCAAATACTCTCTACTTCCATTCCCATCCCAAATCCCAATTCCTAAATCCGATA 611920 Query 112196 ATAACTCTCTTGCATTTGTGGATCCTCTAATAAACCATAGCAATTCTTCCACAACCCCTT 112255 |||| | | ||| ||| || || | ||||||||| || |||||||| ||||| || Sbjct 611919 ATAAATTCC---CATCTGTTGAACCCCGAATAAACCAAAGTAATTCTTCAACAACACCAC 611863 Query 112256 TCCAGTACACTCTTTTAGTAGTTAGCAGTGGAAAA---GAATCATGTAGGGAGAATCT-- 112310 || | |||||||||||||| || | ||| ||| |||||| | || |||||||| Sbjct 611862 GTAAGAAAACTCTTTTAGTAGTGAGTAATGGGAAAGTTGAATCACGAAGTGAGAATCTCA 611803 Query 112311 TAG-TTGTGGACCAAACAAAGACAATGTTCCTACTCCAGTTCTATCGGG 112358 ||| | ||||| | |||| | ||||| ||| || |||| |||||| Sbjct 611802 TAGCTGGTGGAGCGAACATTGCTAATGTACCTGTACCTGTTCGATCGGG 611754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391944854813428