Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq10 136 4e-27 >seq10 Length=738709 Score = 136 bits (150), Expect = 4e-27 Identities = 328/491 (67%), Gaps = 4/491 (1%) Strand=Plus/Plus Query 79299 GAAAGCCTCCCCATAGACA-TCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCC 79357 |||||||| |||| |||| |||| || || || ||||| || || ||||||| || Sbjct 610463 GAAAGCCTTTCCAT-GACAATCGGCCAATCCAGGACACTCATGTGGACACATCAAAGCCC 610521 Query 79358 AGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGA 79417 | || | |||| || || |||||| || ||||||||||||| || ||| | Sbjct 610522 ACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGCGTAGAATA 610581 Query 79418 GGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGA 79477 || || || | || || | || || || || || |||| |||||| | | Sbjct 610582 AATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAAGTCGAAAA 610641 Query 79478 TGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCT 79537 |||||||||||| ||||| || || ||||| || | ||| |||||| || || | Sbjct 610642 CGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTGGTCGCTTGTTACCACCTT 610701 Query 79538 GGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA 79597 | | |||||| || || || || | || |||| ||||| || ||||| |||| | | Sbjct 610702 GATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACCGTTCGAGT 610761 Query 79598 CGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCG 79656 ||||| || || ||| | ||| | || |||||||| | | | || || ||| Sbjct 610762 ACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTT-GTGAATGTTGAGACCG 610820 Query 79657 ATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCG 79716 || || || | ||||||||| || || ||||| || || ||||| || ||| Sbjct 610821 ATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGATACCTTCG 610880 Query 79717 ATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCG 79776 || || || |||||||| |||| ||||| || ||| | ||||||| ||||| Sbjct 610881 ATGGAATCCTCCTTCATCGCGATGAGGAAACATGACGAAAGTTGTGGGTGAGGAGTACCC 610940 Query 79777 GCGTTGAAGAG 79787 |||||||| || Sbjct 610941 GCGTTGAAAAG 610951 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 20627 ATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGC 20686 ||||||| ||| || ||||| ||| |||||| |||||||||| | || ||||| || Sbjct 609349 ATTTACAAGACGGTCTGGGAGATCAGCCAGAAGGCCATCATCGACCTCGCTGCCGACCGT 609290 Query 20687 GGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCC-GAGCCTGGC 20745 || |||| |||||||||||||| |||||||| || | || ||||| || || Sbjct 609289 GGTGCCTTTATCGACCAGTCCCAATCGCTCAACATCCACTTGACCAATCCATCTCCAGGT 609230 Query 20746 GAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTA 20805 || || | ||| ||||| | ||||||||| | ||||| ||||| || ||||||||||| Sbjct 609229 CAA-CTCACCTCAATGCACTTCTACGGCTGGAAGAAGGGACTCAAAACCGGCATGTACTA 609171 Query 20806 TCTGCGGACCCGA 20818 || || || ||| Sbjct 609170 CCTCCGAACTCGA 609158 Score = 116 bits (128), Expect = 4e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 78187 CGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATA 78246 || ||||| | ||||||||||| || ||||| ||||||||||| ||||| | |||||| Sbjct 609159 CGAGTTCGGAGGTAGTACATGCCGGTTTTGAGTCCCTTCTTCCAGCCGTAGAAGTGCATT 609218 Query 78247 CTCGACAGCTTGGCCAG-ACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTC 78305 | || ||| || | | || || || | |||||||||||| ||||||||||| Sbjct 609219 GAGGTGAG-TTGACCTGGAGATGGATTGGTCAAGTGGATGTTGAGCGATTGGGACTGGTC 609277 Query 78306 GATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGAT 78365 ||| | ||||| |||||||| || | |||||||| | ||| || |||||||||| Sbjct 609278 GATAAAGGCACCACGGTCGGCAGCGAGGTCGATGATGGCCTTCTGGCTGATCTCCCAGAC 609337 Query 78366 GGTCCGGTAAATGGCC 78381 ||| |||||| ||| Sbjct 609338 CGTCTTGTAAATAGCC 609353 Score = 114 bits (126), Expect = 1e-20 Identities = 356/543 (66%), Gaps = 6/543 (1%) Strand=Plus/Minus Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276 ||||||||||| ||||| |||| || | ||| |||||||| | || |||||| Sbjct 610951 CTTTTCAACGCGGGTACTCCTCACCCACAACTTTCGTCATGTTTCCTCATCGCGATGAAG 610892 Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336 || || ||| || || ||||| || || ||||| || || ||||||||| Sbjct 610891 GAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCCAAGACA 610832 Query 19337 TCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGG 19395 | || |||||||| || || | | | || || || | | ||| | ||| ||| Sbjct 610831 GCAGGTGGTATCGGTCTCAACATTCAC-AACATTCGTGCCAAGGGTTCTTACATCGCTGG 610773 Query 19396 GACGAACGGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCA 19454 || ||||| ||| ||| ||||||||| || ||||| || | | | || || || Sbjct 610772 TACAAACGG-GTACTCGAACGGTATCGTTCCTATGCTTCGAGCTTACGACGCAACCGCTC 610714 Query 19455 GGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCAT 19514 | |||||| | || || || ||| || || | || ||||| ||||||||||||| Sbjct 610713 GTTACGTCGATCAAGGTGGTAACAAGCGACCAGGTGCCTTTGCCATTTACCTCGAGCCAT 610654 Query 19515 GGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGC 19574 ||||||| ||||| | || || |||| || || || || ||| | || || | | Sbjct 610653 GGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGAAGAAGTTC 610594 Query 19575 GCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGA 19634 | ||| || | ||| || |||||||| ||||| || |||||| || || Sbjct 610593 GAGCTCGTGATTTATTCTACGCGTTGTGGATCCCGGATCTTTTCATGCGTCGTGTAGAAG 610534 Query 19635 AGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGA-CGTCTAC 19693 |||| | ||| ||| ||||||| || || || || ||||| | |||| ||| | Sbjct 610533 AGGATGGAGAGTGGGCTTTGATGTGTCCACATGAGTGTCCTGGATTGGCCGATTGTC-AT 610475 Query 19694 GGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTG 19753 || |||| ||| |||| | ||| | | |||| |||||| || || |||| || Sbjct 610474 GGAAAGGCTTTCGATGAACTATACGAGTCATACGAGAGGCAGGGCAAGTACAGGAAGATG 610415 Query 19754 GTC 19756 || Sbjct 610414 ATC 610412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523730376640