Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq10 136 4e-27
>seq10
Length=738709
Score = 136 bits (150), Expect = 4e-27
Identities = 328/491 (67%), Gaps = 4/491 (1%)
Strand=Plus/Plus
Query 79299 GAAAGCCTCCCCATAGACA-TCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCC 79357
|||||||| |||| |||| |||| || || || ||||| || || ||||||| ||
Sbjct 610463 GAAAGCCTTTCCAT-GACAATCGGCCAATCCAGGACACTCATGTGGACACATCAAAGCCC 610521
Query 79358 AGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGA 79417
| || | |||| || || |||||| || ||||||||||||| || ||| |
Sbjct 610522 ACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGCGTAGAATA 610581
Query 79418 GGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGA 79477
|| || || | || || | || || || || || |||| |||||| | |
Sbjct 610582 AATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAAGTCGAAAA 610641
Query 79478 TGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCT 79537
|||||||||||| ||||| || || ||||| || | ||| |||||| || || |
Sbjct 610642 CGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCTGGTCGCTTGTTACCACCTT 610701
Query 79538 GGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA 79597
| | |||||| || || || || | || |||| ||||| || ||||| |||| | |
Sbjct 610702 GATCGACGTAACGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACCGTTCGAGT 610761
Query 79598 CGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCG 79656
||||| || || ||| | ||| | || |||||||| | | | || || |||
Sbjct 610762 ACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTT-GTGAATGTTGAGACCG 610820
Query 79657 ATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCG 79716
|| || || | ||||||||| || || ||||| || || ||||| || |||
Sbjct 610821 ATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGATACCTTCG 610880
Query 79717 ATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCG 79776
|| || || |||||||| |||| ||||| || ||| | ||||||| |||||
Sbjct 610881 ATGGAATCCTCCTTCATCGCGATGAGGAAACATGACGAAAGTTGTGGGTGAGGAGTACCC 610940
Query 79777 GCGTTGAAGAG 79787
|||||||| ||
Sbjct 610941 GCGTTGAAAAG 610951
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 20627 ATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGC 20686
||||||| ||| || ||||| ||| |||||| |||||||||| | || ||||| ||
Sbjct 609349 ATTTACAAGACGGTCTGGGAGATCAGCCAGAAGGCCATCATCGACCTCGCTGCCGACCGT 609290
Query 20687 GGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCC-GAGCCTGGC 20745
|| |||| |||||||||||||| |||||||| || | || ||||| || ||
Sbjct 609289 GGTGCCTTTATCGACCAGTCCCAATCGCTCAACATCCACTTGACCAATCCATCTCCAGGT 609230
Query 20746 GAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTA 20805
|| || | ||| ||||| | ||||||||| | ||||| ||||| || |||||||||||
Sbjct 609229 CAA-CTCACCTCAATGCACTTCTACGGCTGGAAGAAGGGACTCAAAACCGGCATGTACTA 609171
Query 20806 TCTGCGGACCCGA 20818
|| || || |||
Sbjct 609170 CCTCCGAACTCGA 609158
Score = 116 bits (128), Expect = 4e-21
Identities = 145/196 (74%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 78187 CGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATA 78246
|| ||||| | ||||||||||| || ||||| ||||||||||| ||||| | ||||||
Sbjct 609159 CGAGTTCGGAGGTAGTACATGCCGGTTTTGAGTCCCTTCTTCCAGCCGTAGAAGTGCATT 609218
Query 78247 CTCGACAGCTTGGCCAG-ACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTC 78305
| || ||| || | | || || || | |||||||||||| |||||||||||
Sbjct 609219 GAGGTGAG-TTGACCTGGAGATGGATTGGTCAAGTGGATGTTGAGCGATTGGGACTGGTC 609277
Query 78306 GATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGAT 78365
||| | ||||| |||||||| || | |||||||| | ||| || ||||||||||
Sbjct 609278 GATAAAGGCACCACGGTCGGCAGCGAGGTCGATGATGGCCTTCTGGCTGATCTCCCAGAC 609337
Query 78366 GGTCCGGTAAATGGCC 78381
||| |||||| |||
Sbjct 609338 CGTCTTGTAAATAGCC 609353
Score = 114 bits (126), Expect = 1e-20
Identities = 356/543 (66%), Gaps = 6/543 (1%)
Strand=Plus/Minus
Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276
||||||||||| ||||| |||| || | ||| |||||||| | || ||||||
Sbjct 610951 CTTTTCAACGCGGGTACTCCTCACCCACAACTTTCGTCATGTTTCCTCATCGCGATGAAG 610892
Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336
|| || ||| || || ||||| || || ||||| || || |||||||||
Sbjct 610891 GAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCCAAGACA 610832
Query 19337 TCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGG 19395
| || |||||||| || || | | | || || || | | ||| | ||| |||
Sbjct 610831 GCAGGTGGTATCGGTCTCAACATTCAC-AACATTCGTGCCAAGGGTTCTTACATCGCTGG 610773
Query 19396 GACGAACGGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCA 19454
|| ||||| ||| ||| ||||||||| || ||||| || | | | || || ||
Sbjct 610772 TACAAACGG-GTACTCGAACGGTATCGTTCCTATGCTTCGAGCTTACGACGCAACCGCTC 610714
Query 19455 GGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCAT 19514
| |||||| | || || || ||| || || | || ||||| |||||||||||||
Sbjct 610713 GTTACGTCGATCAAGGTGGTAACAAGCGACCAGGTGCCTTTGCCATTTACCTCGAGCCAT 610654
Query 19515 GGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGC 19574
||||||| ||||| | || || |||| || || || || ||| | || || | |
Sbjct 610653 GGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGAAGAAGTTC 610594
Query 19575 GCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGA 19634
| ||| || | ||| || |||||||| ||||| || |||||| || ||
Sbjct 610593 GAGCTCGTGATTTATTCTACGCGTTGTGGATCCCGGATCTTTTCATGCGTCGTGTAGAAG 610534
Query 19635 AGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGA-CGTCTAC 19693
|||| | ||| ||| ||||||| || || || || ||||| | |||| ||| |
Sbjct 610533 AGGATGGAGAGTGGGCTTTGATGTGTCCACATGAGTGTCCTGGATTGGCCGATTGTC-AT 610475
Query 19694 GGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTG 19753
|| |||| ||| |||| | ||| | | |||| |||||| || || |||| ||
Sbjct 610474 GGAAAGGCTTTCGATGAACTATACGAGTCATACGAGAGGCAGGGCAAGTACAGGAAGATG 610415
Query 19754 GTC 19756
||
Sbjct 610414 ATC 610412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548523730376640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |