Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq10 167 3e-36 >seq10 Length=738709 Score = 167 bits (184), Expect = 3e-36 Identities = 320/464 (69%), Gaps = 6/464 (1%) Strand=Plus/Minus Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353 || |||||||| ||||| |||||| || | ||| || ||||| | ||||||||| Sbjct 610951 CTTTTCAACGCGGGTACTCCTCACCCACAACTTTCGTCATGTTTCCTCATCGCGATGAAG 610892 Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413 || || || ||||| || ||||| || || ||||| |||||| ||||||||| Sbjct 610891 GAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCCAAGACA 610832 Query 53414 TCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGG 53472 | |||||||||||| || || | | | ||| | ||||| || || | ||| || Sbjct 610831 GCAGGTGGTATCGGTCTCAACATTCAC-AACATTCGTGCCAAGGGTTCTTACATCGCTGG 610773 Query 53473 GACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCG 53532 || ||||| | | | || ||||| |||||||| || | | | || || || || Sbjct 610772 TACAAACGGGTACTCGAACGGTATCGTTCCTATGCTTCGAGCTTACGACGCAACCGCTCG 610713 Query 53533 GTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGT 53591 |||||| | || |||||| ||||| | ||| | | || ||||| ||||||||||| | Sbjct 610712 TTACGTCGATCAAGGTGGTAACAAGCGACCAGGTGCCTTT-GCCATTTACCTCGAGCCAT 610654 Query 53592 GGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGC 53651 ||||||||||| || | || ||| |||| || || ||||| ||| | ||||| | | Sbjct 610653 GGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCACGGTAAAGAAGAAGTTC 610594 Query 53652 GCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAG 53710 | ||||| | || ||| || ||||||| ||||| || ||||||| || || Sbjct 610593 GAGCTCGTGATTTATTCTAC-GCGTTGTGGATCCCGGATCTTTTCATGCGTCGTGTAGAA 610535 Query 53711 AAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGG 53754 |||| | |||||| ||||||| || | ||||| || || Sbjct 610534 GAGGATGGAGAGTGGGCTTTGATGTGTCCACATGAGTGTCCTGG 610491 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 55736 ATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGT 55795 |||||| |||||| |||||||| |||||| | || ||| | ||| || ||| Sbjct 609349 ATTTACAAGACGGTCTGGGAGATCAGCCAGAAGGCCATCATCGACCTCGCTGCCGACCGT 609290 Query 55796 GGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACT-GGC 55854 ||||| | |||||||||||||| || || |||||| | || ||||| || | || Sbjct 609289 GGTGCCTTTATCGACCAGTCCCAATCGCTCAACATCCACTTGACCAATCCATCTCCAGGT 609230 Query 55855 CAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTA 55914 ||| | | ||| |||||||| ||||| ||||||||||||||||| || || |||||||| Sbjct 609229 CAACTC-ACCTCAATGCACTTCTACGGCTGGAAGAAGGGACTCAAAACCGGCATGTACTA 609171 Query 55915 TCTGCGGACCCG 55926 || || || || Sbjct 609170 CCTCCGAACTCG 609159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214932928800