Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 9e-30
seq13 132 5e-26
>seq1
Length=1746732
Score = 145 bits (160), Expect = 9e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || || || ||||| ||||| || || |||||
Sbjct 1066762 ATGCAAATCTTCGTCAAGACTTTGACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCC 1066703
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | || | ||| | || ||||| |||||||| || || ||||| || |||
Sbjct 1066702 GATACGATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAG 1066643
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | ||||| || ||||| |||||||| || | |||||| || | ||||| ||
Sbjct 1066642 CAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAAC 1066583
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||||||||| || || |||||| | || | || ||||| ||||||
Sbjct 1066582 ATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCGACTTCGTGGTGGA 1066535
Score = 123 bits (136), Expect = 3e-23
Identities = 122/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||||||||| || | || || || ||||| || | ||||| |||||
Sbjct 1066535 AATGCAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTC 1066476
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| || | ||| |||| | || ||||| ||||||||||| ||||| || || ||
Sbjct 1066475 CGATACGATCGATAATGTGAAATCCAAGATTCAAGACAAGGAGGGTATTCCACCTGATCA 1066416
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
||||||||| || |||||||| ||||| ||||| ||||
Sbjct 1066415 GCAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATG 1066378
>seq13
Length=658505
Score = 132 bits (146), Expect = 5e-26
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486
||||| || ||||| || || || ||||||||||| || | ||| | ||| | |||
Sbjct 564014 CTTACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAG 563955
Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546
| || || |||||||||||||| || || || || || ||| | | || || |||||
Sbjct 563954 TCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGGA 563895
Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606
||||| |||||||||| | | || ||| | || || || |||| ||||| || ||||||
Sbjct 563894 AAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCTT 563835
Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632
||| | ||| | |||||||| |||||
Sbjct 563834 CATTTGGTCCTCCGTCTTCGTGGTGG 563809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309287894720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |