Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 3e-27
seq13 89.7 4e-13
>seq1
Length=1746732
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| |||| || || |||| ||||| ||||| || | |||
Sbjct 1066762 ATGCAAATCTTCGTCAAGACTTTGACAGGGAAAACTATCACTCTCGAAGTCGAGTCTTCC 1066703
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || || || ||||||||||| ||||| || || || |||||
Sbjct 1066702 GATACGATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAG 1066643
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| |||||| | |||||| || || | ||||| ||||||
Sbjct 1066642 CAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAAC 1066583
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | ||||||||| | || | || ||||| ||
Sbjct 1066582 ATCCAAAAGGAGTCTACACTTCATTTGGTTCTCCGACTTCGTGGTGGAAT 1066533
>seq13
Length=658505
Score = 89.7 bits (98), Expect = 4e-13
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 27008 TCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAA 27067
||| || || ||| | || || || || || || | |||||| | || || | |||||
Sbjct 564015 TCTTACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAA 563956
Query 27068 ACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGG 27127
|| || || ||||| || || || ||||| ||||||||| | || || | ||| ||
Sbjct 563955 GTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGG 563896
Query 27128 CAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTT 27187
|| || | || || || ||| | || ||||||||||| || |||||||| || |
Sbjct 563895 AAAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCT 563836
Query 27188 ACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||| | ||| | || |||||
Sbjct 563835 TCATTTGGTCCTCCGTCTTCGTGGTGG 563809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917551909120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |