Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq13 158 3e-33 seq1 116 9e-21 >seq13 Length=658505 Score = 158 bits (174), Expect = 3e-33 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | |||||||| ||||| || |||||||| ||||||| || || Sbjct 563814 ACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGT 563873 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 ||| ||||| || |||||||| || |||||||| | | ||||| ||||| || | || Sbjct 563874 CCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACC 563933 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || || || ||||||||||| || ||||||||||| Sbjct 563934 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAG 563993 Query 211073 AGTGATCGTCTTTCCCGTGAGA 211094 ||||| ||||| || || ||| Sbjct 563994 GGTGATGGTCTTACCTGTAAGA 564015 >seq1 Length=1746732 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||||| || || | ||||| || ||||| ||||||||||| || || | || || Sbjct 1066541 ACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGT 1066600 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| || || || || ||||| || | | || || |||||||| | || Sbjct 1066601 ACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACC 1066660 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| || ||||| || ||||| ||||| || || || || || ||||| Sbjct 1066661 TTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAG 1066720 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| || || || || | |||||| || || | ||||| Sbjct 1066721 AGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762 Score = 89.7 bits (98), Expect = 1e-12 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 210948 AGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGA 211007 || || | ||||||||| ||||||||||| |||||||| || |||||||| ||||| || Sbjct 1264510 AGAGTTCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGATCAGGTGGG 1264569 Query 211008 ACTCCTTCCTTGTCCTGGATCT 211029 | || |||||||||||||||| Sbjct 1264570 ATACCCTCCTTGTCCTGGATCT 1264591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159149683144940