Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 8e-28
seq13 123 6e-23
>seq1
Length=1746732
Score = 140 bits (154), Expect = 8e-28
Identities = 140/182 (77%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 225533 CATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTT 225592
|| ||||||| | ||| || || |||||||| |||||||| ||||| |||||||| || |
Sbjct 1066354 CACTGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCT 1066413
Query 225593 GTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGT 225652
| || || || |||||||| ||||||||||| ||||| |||||| ||||| || |
Sbjct 1066414 GCTGATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTAT 1066473
Query 225653 CTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCA 225712
| || | || || || |||||||| || || || ||||||||||| | || | |||||
Sbjct 1066474 CGGAAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCA 1066533
Query 225713 TT 225714
||
Sbjct 1066534 TT 1066535
Score = 104 bits (114), Expect = 6e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||| || || | || || || || || ||||||| ||||| |||| | |||
Sbjct 1066541 ACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGT 1066600
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||||| || || || || ||||| || | | || || || || || |||||
Sbjct 1066601 ACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACC 1066660
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||| ||||| ||| || ||||| || || || | || || || |
Sbjct 1066661 TTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAG 1066720
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || || |||||||| || | ||| | ||||||
Sbjct 1066721 AGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762
>seq13
Length=658505
Score = 123 bits (136), Expect = 6e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| | || ||||| || || || |||| |||||||| | | |||
Sbjct 563814 ACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGT 563873
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| ||||| || |||||||| ||||||||||| | | ||||| || || || |||||
Sbjct 563874 CCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACC 563933
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||||||||| || | || || || |
Sbjct 563934 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAG 563993
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| ||||| || ||
Sbjct 563994 GGTGATGGTCTTACCTGT 564011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192528816428264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |