Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 140 8e-28 seq13 123 6e-23 >seq1 Length=1746732 Score = 140 bits (154), Expect = 8e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 225533 CATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTT 225592 || ||||||| | ||| || || |||||||| |||||||| ||||| |||||||| || | Sbjct 1066354 CACTGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCT 1066413 Query 225593 GTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGT 225652 | || || || |||||||| ||||||||||| ||||| |||||| ||||| || | Sbjct 1066414 GCTGATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTAT 1066473 Query 225653 CTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCA 225712 | || | || || || |||||||| || || || ||||||||||| | || | ||||| Sbjct 1066474 CGGAAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCA 1066533 Query 225713 TT 225714 || Sbjct 1066534 TT 1066535 Score = 104 bits (114), Expect = 6e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || || || || || ||||||| ||||| |||| | ||| Sbjct 1066541 ACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGT 1066600 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || || || || ||||| || | | || || || || || ||||| Sbjct 1066601 ACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACC 1066660 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||| ||||| ||| || ||||| || || || | || || || | Sbjct 1066661 TTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAG 1066720 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || |||||||| || | ||| | |||||| Sbjct 1066721 AGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762 >seq13 Length=658505 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| | || ||||| || || || |||| |||||||| | | ||| Sbjct 563814 ACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGT 563873 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || ||||| || |||||||| ||||||||||| | | ||||| || || || ||||| Sbjct 563874 CCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACC 563933 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| || | || || || | Sbjct 563934 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAG 563993 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 563994 GGTGATGGTCTTACCTGT 564011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528816428264