Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 2e-28
seq13 113 1e-19
>seq1
Length=1746732
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| ||| || | |||||| |||||||| |||||||||||||| |||| | ||| |
Sbjct 1066545 AGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGA 1066604
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|| ||||| || ||| |||||||| || | ||||||||| || | | ||| ||||||
Sbjct 1066605 CCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGGATACCTTCC 1066664
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| |||||||| || || || | || | | || ||| ||| ||||| |||||
Sbjct 1066665 TTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACTTCGAGAGTG 1066724
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||||| || || | |||||| ||||||| |||||
Sbjct 1066725 ATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762
>seq13
Length=658505
Score = 113 bits (124), Expect = 1e-19
Identities = 143/195 (73%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| | ||||||||||||||| || |||||||||||||| | || ||| || |||||
Sbjct 563823 GAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATC 563882
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| || |||||||| | |||||| || || | | ||| || |||||
Sbjct 563883 CTCGAGCTGCTTT--CCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTG 563940
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| || || || |||||| | || | | |||| ||| ||| || || || || ||
Sbjct 563941 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATG 564000
Query 152070 GTTTTGCCCGTGAGA 152084
|| || || || |||
Sbjct 564001 GTCTTACCTGTAAGA 564015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818493800676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |