Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1 176 9e-39
seq13 129 1e-24
seq8 102 2e-16
>seq1
Length=1746732
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || || |||| ||| | || || ||||||||||||||||| |
Sbjct 1066536 CCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAG 1066595
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || || || || |||||||| ||||| || ||||| | || || ||| ||
Sbjct 1066596 AGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGG 1066655
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||| ||||||||||| ||||| | |||||| ||||||| || || |||| ||||||
Sbjct 1066656 ATACCTTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACT 1066715
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||||||||| || || || ||||||||||| ||||| || |||||
Sbjct 1066716 TCGAGAGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762
Score = 116 bits (128), Expect = 8e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981
|||| |||| | || | |||||| || || || || || |||||||| | ||| || |
Sbjct 1066357 TGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCT 1066416
Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041
| ||| |||||||||||||||||||| ||||| | ||| || ||||||| || || |
Sbjct 1066417 GATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGG 1066476
Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
||| || || || | ||||| || || || |||||||| || || || || ||||||
Sbjct 1066477 AAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535
>seq13
Length=658505
Score = 129 bits (142), Expect = 1e-24
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| ||| | || || || ||||||||||| || |
Sbjct 563808 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 563867
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || | |||||||| || || || || || |||||||| | ||||| ||| ||
Sbjct 563868 TAGAGTCCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 563927
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| | || || | ||||| ||||| |||| || ||
Sbjct 563928 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 563987
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
||||| ||||| |||||||| ||
Sbjct 563988 CTCGAGGGTGATGGTCTTACCTGT 564011
>seq8
Length=789079
Score = 102 bits (112), Expect = 2e-16
Identities = 126/169 (75%), Gaps = 5/169 (3%)
Strand=Plus/Plus
Query 43974 TCGGATT-TGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAA 44032
|| |||| | |||||| || || ||||| | || || |||||||||||||| ||||||
Sbjct 720326 TCAGATTCTACCAAGCTTCTACGTCGGAACTCTATGGCAAGGTTCAGGAGATACCTCAAT 720385
Query 44033 CAGAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATT 44092
| || | || ||||||||||| ||||||| ||||| || || ||||| ||||| || |
Sbjct 720386 CTGAGACTACACCGTTTTATCCGAGGAGTCCGTATGGAGTCGCAAAGCTGTATGCATACT 720445
Query 44093 GGAT--TTGTAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAAT 44139
|||| |||| || || | || ||||| || |||| | ||| |||
Sbjct 720446 GGATCGTTGT--CAACTACAGGGAATCGTACGGAATGTATGCTTGCAAT 720492
Score = 95.1 bits (104), Expect = 3e-14
Identities = 117/159 (74%), Gaps = 1/159 (1%)
Strand=Plus/Plus
Query 43974 TCGGATT-TGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAA 44032
|| |||| | ||| || ||||| |||||| | || || ||||| |||| || || |
Sbjct 786203 TCAGATTCTACCAGGCCTCGACGTCGGAGCTTTATGGTCAGGTTGTCGAGACGCCACAGA 786262
Query 44033 CAGAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATT 44092
|| | ||| ||||||||||| |||||||||||||||| || ||||| ||||| || |
Sbjct 786263 GTGAGACGACACCGTTTTATCCGAGGAGTCCATATGGTGTCGCCAAGCTGTATGCGTACT 786322
Query 44093 GGATTTGTAAAAATTATCGCGAGTCGTATGGGATGTTCG 44131
||||| || || | |||||||| || |||||||
Sbjct 786323 GGATTGTCGTCAACTACAGGGAGTCGTACGGCATGTTCG 786361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737107830024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |