Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 176 9e-39 seq13 129 1e-24 seq8 102 2e-16 >seq1 Length=1746732 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| ||| | || || ||||||||||||||||| | Sbjct 1066536 CCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAG 1066595 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || |||||||| ||||| || ||||| | || || ||| || Sbjct 1066596 AGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGG 1066655 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| ||||||||||| ||||| | |||||| ||||||| || || |||| |||||| Sbjct 1066656 ATACCTTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATCGTATCGGAAGACTCGACT 1066715 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| || || || ||||||||||| ||||| || ||||| Sbjct 1066716 TCGAGAGTGATAGTTTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 1066762 Score = 116 bits (128), Expect = 8e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 |||| |||| | || | |||||| || || || || || |||||||| | ||| || | Sbjct 1066357 TGTAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCT 1066416 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 | ||| |||||||||||||||||||| ||||| | ||| || ||||||| || || | Sbjct 1066417 GATCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACATTATCGATCGTATCGG 1066476 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| || || || | ||||| || || || |||||||| || || || || |||||| Sbjct 1066477 AAGACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 1066535 >seq13 Length=658505 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| ||| | || || || ||||||||||| || | Sbjct 563808 ACCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 563867 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | |||||||| || || || || || |||||||| | ||||| ||| || Sbjct 563868 TAGAGTCCTACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGTTGATCAGGTGG 563927 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| ||||| |||| || || Sbjct 563928 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 563987 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| |||||||| || Sbjct 563988 CTCGAGGGTGATGGTCTTACCTGT 564011 >seq8 Length=789079 Score = 102 bits (112), Expect = 2e-16 Identities = 126/169 (75%), Gaps = 5/169 (3%) Strand=Plus/Plus Query 43974 TCGGATT-TGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAA 44032 || |||| | |||||| || || ||||| | || || |||||||||||||| |||||| Sbjct 720326 TCAGATTCTACCAAGCTTCTACGTCGGAACTCTATGGCAAGGTTCAGGAGATACCTCAAT 720385 Query 44033 CAGAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATT 44092 | || | || ||||||||||| ||||||| ||||| || || ||||| ||||| || | Sbjct 720386 CTGAGACTACACCGTTTTATCCGAGGAGTCCGTATGGAGTCGCAAAGCTGTATGCATACT 720445 Query 44093 GGAT--TTGTAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAAT 44139 |||| |||| || || | || ||||| || |||| | ||| ||| Sbjct 720446 GGATCGTTGT--CAACTACAGGGAATCGTACGGAATGTATGCTTGCAAT 720492 Score = 95.1 bits (104), Expect = 3e-14 Identities = 117/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 43974 TCGGATT-TGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAA 44032 || |||| | ||| || ||||| |||||| | || || ||||| |||| || || | Sbjct 786203 TCAGATTCTACCAGGCCTCGACGTCGGAGCTTTATGGTCAGGTTGTCGAGACGCCACAGA 786262 Query 44033 CAGAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATT 44092 || | ||| ||||||||||| |||||||||||||||| || ||||| ||||| || | Sbjct 786263 GTGAGACGACACCGTTTTATCCGAGGAGTCCATATGGTGTCGCCAAGCTGTATGCGTACT 786322 Query 44093 GGATTTGTAAAAATTATCGCGAGTCGTATGGGATGTTCG 44131 ||||| || || | |||||||| || ||||||| Sbjct 786323 GGATTGTCGTCAACTACAGGGAGTCGTACGGCATGTTCG 786361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737107830024