Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08-
24] 156 sequences; 23,185,503 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq13 134 3e-26
seq1 120 7e-22
>seq13
Length=658505
Score = 134 bits (148), Expect = 3e-26
Identities = 140/184 (76%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 177941 TCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAA 178000
||| ||||| || || |||||||||||||| || || ||||||||||| || |||||
Sbjct 564015 TCTTACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAA 563956
Query 178001 ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGG 178060
||||| |||||||| || || ||||| || || || || | | |||||||| ||
Sbjct 563955 GTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGG 563896
Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120
||| |||||||| ||||| |||||||| | ||||| ||| |||| || || || || ||
Sbjct 563895 AAAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCT 563836
Query 178121 GCAT 178124
|||
Sbjct 563835 TCAT 563832
>seq1
Length=1746732
Score = 120 bits (132), Expect = 7e-22
Identities = 123/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || |||||| | ||||| ||||| ||||| | ||||| || || ||
Sbjct 1066531 CAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTCCGAT 1066472
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| |||||||| ||||| || || || || || || |||||
Sbjct 1066471 ACGATCGATAATGTGAAATCCAAGATTCAAGACAAGGAGGGTATTCCACCTGATCAGCAG 1066412
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGAC 178084
|| |||||||| || ||||| |||||||||||||| |||||
Sbjct 1066411 CGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGGCAGGAC 1066371
Score = 87.8 bits (96), Expect = 4e-12
Identities = 74/91 (81%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065
|||| |||||||| || || ||||| || || || ||||| || ||||||||||| || |
Sbjct 1264591 AGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAACGTCTCATCTTCGCCGGCAAGC 1264532
Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096
|||||||||||||| | ||||| |||| ||
Sbjct 1264531 AGCTCGAAGATGGACGAACTCTCTCCGACTA 1264501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203728794042264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |