Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001712455.1_202016-08- 24] 156 sequences; 23,185,503 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq13 134 3e-26 seq1 120 7e-22 >seq13 Length=658505 Score = 134 bits (148), Expect = 3e-26 Identities = 140/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 177941 TCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAA 178000 ||| ||||| || || |||||||||||||| || || ||||||||||| || ||||| Sbjct 564015 TCTTACAGGTAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAA 563956 Query 178001 ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGG 178060 ||||| |||||||| || || ||||| || || || || | | |||||||| || Sbjct 563955 GTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGG 563896 Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120 ||| |||||||| ||||| |||||||| | ||||| ||| |||| || || || || || Sbjct 563895 AAAGCAGCTCGAGGATGGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCT 563836 Query 178121 GCAT 178124 ||| Sbjct 563835 TCAT 563832 >seq1 Length=1746732 Score = 120 bits (132), Expect = 7e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || |||||| | ||||| ||||| ||||| | ||||| || || || Sbjct 1066531 CAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTCCGAT 1066472 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| |||||||| ||||| || || || || || || ||||| Sbjct 1066471 ACGATCGATAATGTGAAATCCAAGATTCAAGACAAGGAGGGTATTCCACCTGATCAGCAG 1066412 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGAC 178084 || |||||||| || ||||| |||||||||||||| ||||| Sbjct 1066411 CGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGGCAGGAC 1066371 Score = 87.8 bits (96), Expect = 4e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065 |||| |||||||| || || ||||| || || || ||||| || ||||||||||| || | Sbjct 1264591 AGATCCAGGACAAGGAGGGTATCCCACCTGATCAACAACGTCTCATCTTCGCCGGCAAGC 1264532 Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 |||||||||||||| | ||||| |||| || Sbjct 1264531 AGCTCGAAGATGGACGAACTCTCTCCGACTA 1264501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203728794042264