Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq75 105 7e-18 >seq75 Length=98333 Score = 105 bits (116), Expect = 7e-18 Identities = 259/393 (66%), Gaps = 0/393 (0%) Strand=Plus/Minus Query 16999 GATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATAT 17058 ||| || ||||| || || || | |||||||| || || ||||| | ||| || || Sbjct 64492 GATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGAT 64433 Query 17059 CGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTC 17118 | |||||| || || || ||||| ||||||||||| | || || || | | || || Sbjct 64432 GGAGGCGAAGGAACCGGAGAAGAAGATACCCTCGACAGCGGCGAAGGCAACGAGACGCTC 64373 Query 17119 GGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTAT 17178 |||| | | ||| |||| | |||||| | |||| || || || ||||| | Sbjct 64372 GGCGAAAGAGGCGCGCTTGTCGCTGATCCATCGGAGAGCCCAGTCAGCCTTCTGCTTGAC 64313 Query 17179 GCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATA 17238 | || || || | ||| | ||| | ||| | || | || || || Sbjct 64312 GACGGGGATGGTCTCGACGGCGTCAAAGAGGAACTCGCGCTGCTCGGGCTCACGGATGTA 64253 Query 17239 CGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCC 17298 || |||||||| || ||| | || ||||| ||||||||||| ||||| || || Sbjct 64252 GGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACC 64193 Query 17299 GTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTC 17358 ||| ||||| ||||| || || |||||||| | ||| || || | || || || Sbjct 64192 GTAGAAGCAACGGGCCTCGGCGGCCTGAACTTCAGAGCTGAAACGCTCGACAAGGTTCTC 64133 Query 17359 GTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||| ||||| |||||| |||||||| || || Sbjct 64132 GTTGACGATACCGTCGGAGGCGGCGAAGAAGGC 64100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517445894840160