Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq25 140 4e-28 >seq25 Length=198755 Score = 140 bits (154), Expect = 4e-28 Identities = 461/718 (64%), Gaps = 34/718 (5%) Strand=Plus/Minus Query 145575 GTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAG 145634 ||| ||| || | | || ||||| | |||| || || || |||| | | |||| Sbjct 54588 GTAACCCGTCACCTCGAAATCCTCGTACTTGAAATCGTCGATATCCTTGATCTCCCTCTT 54529 Query 145635 GATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCAC 145694 ||| |||||| |||| || ||| || || |||||| | ||||| ||||| || Sbjct 54528 GATGCTGAGCTTGGGGAATGGCAACGGATCTCTCTCCAGCTGCACCTTCAACGGCTCGAC 54469 Query 145695 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCC 145754 ||| | ||| |||||||| || |||| | | | || || |||||| | Sbjct 54468 GTGATCCTTGTACACGTGCGCATCTCCCATGGCCAACACCAACTCTTTCGGCTCGCAATC 54409 Query 145755 CGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCC 145814 ||| | | ||||| ||||||||||| ||| | ||||| || |||||||| ||||| || Sbjct 54408 CGTCACCTTGGCGATCATGTAGGTCAACAGCGCATAGCTCGCGATGTTGAACGGCACACC 54349 Query 145815 CAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT---------CCCCGCC 145865 ||| |||| || | || |||||||||| ||| |||||||| | | |||| Sbjct 54348 CAGACCCAAATCGCAGGATCGCTGGTACATCTGACAGGAGAGGTGTTTCTTACCTTCGCC 54289 Query 145866 C---------------------GCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCA 145903 | | |||| ||||||| ||| | | |||||| || |||| Sbjct 54288 CTTGGCGTACGCGTCGAGGTTGGACACGAAGAACTGCGCA-AACATGTGGCAAGGGGGCA 54230 Query 145904 GGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA-GCCTCCTGCTCTCG 145962 | |||||| || ||| ||||||||| ||| |||| | || || || | | | Sbjct 54229 GAGCCATGAGTTCGAGATCCTTCGGGTTCCATGCGCTGAGCAAGATGCGTCGATCGGT-G 54171 Query 145963 GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAA 146022 ||||| | ||||| | || | | ||||||||| ||||| ||||| |||| Sbjct 54170 GGGTTGTTGCGGATCTTGTCGATGACTTGGGCGAGCTGGTCTACGCCTTGCCCTGTGTAA 54111 Query 146023 TCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGC 146082 |||| | | |||| ||| | || || ||||| | ||| ||||| ||||||||||| Sbjct 54110 TCTGCGTCGCAGTCGGTGTAGGATGCGCCAAAGTGTCGCCATTGGAAGCCGTAGACGGGG 54051 Query 146083 CCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCG 146142 |||| ||| || | ||| || || | ||||||| || || || ||| Sbjct 54050 CCCAAGTCGCCTTCACGGCGGTGGGAGAGGCCACGAGAGTCGAGGAATTCGCGCGATCCG 53991 Query 146143 TTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTG 146202 || ||||||| || | || ||| | | | |||| || || || || || Sbjct 53990 TTACCGTCCCAAATATGAACTCCCTTGTCCGTGAGCAGCTTCGAATCGGTCTTGCCAGCT 53931 Query 146203 ATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCA 146260 | ||||||||| ||||| || || || || | ||||||||| || || || |||| Sbjct 53930 ACGAACCAGAGAAGCTCCTCCAGCACTCCGCGGAAGAAGACCCGTTTCGTCGTGAGCA 53873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589963121704480