Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq33 86.0 5e-12 >seq33 Length=164952 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 5639 CCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCG 5698 || ||||||||||| | |||||||| || | ||| || |||| |||||||| || Sbjct 87112 CCAAAGTTGAACAGAAGCACGCCCAACAATCCCCTGTAATCCTCGTCGATCACGCCGGCT 87053 Query 5699 CCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAG 5755 ||| ||||||| ||||||| |||||| ||||| || || ||||| || |||||| Sbjct 87052 CCCGTGTCGATGCCGTGCTTGCTCGCCAGCCCGGAACGCGGCGCCACACGACCGTAG 86996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429973621269344