Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq96 170 3e-38 >seq96 Length=70390 Score = 170 bits (188), Expect = 3e-38 Identities = 186/246 (76%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 ||||||| | ||||| |||||||| || ||||||||||| |||||||| ||||| || || Sbjct 36681 CAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCGCG 36739 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 ||||||||| || |||||| |||| || || |||| || |||| |||| ||| | || Sbjct 36740 TCGTGGTGGTGTTAAGCGTATCTCCGGTCTGATCTACGACGAGACCCGTGGTGTCCTCAA 36799 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | |||||||| || | ||||||| ||| | || ||| || |||||||| || || || Sbjct 36800 GCTCTTCCTCGAGTCGGTTATCCGTGACTCGGTCACCTACACTGAGCACGCCAAGCGCAA 36859 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 |||||| ||||| | || | ||||| || | || || || ||||| | |||| || Sbjct 36860 GACTGTTACCTCGCTCGACGTTGTCTACGCTCTCAAGCGCCAGGGCCGCACCCTTTACGG 36919 Query 16687 TTTTGG 16692 ||| || Sbjct 36920 TTTCGG 36925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79061108700516