Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq27 104 2e-17 >seq27 Length=198227 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || || || || | ||||| ||||| | ||||| Sbjct 160177 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATCACTCTCGAAGTTGAATCCTCG 160236 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| || || || || || || || Sbjct 160237 GACACCATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 160296 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| || || || |||||||| |||| | | | | |||||| ||| Sbjct 160297 CAACGTCTCATTTTCGCAGGAAAGCAACTCGAGGATGGCCGCACCCTTTCCGACTACAAC 160356 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || ||||| ||| |||| || ||| || ||||| | || || Sbjct 160357 ATTCAGAAGGAATCCACTCTCCACCTTGTCTTGCGACTTCGTGGTGG 160403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478570185688640