Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq27 98.7 8e-16 seq18 87.8 1e-12 >seq27 Length=198227 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||| | | |||| | || Sbjct 160160 AGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTTCGTCCATCT 160101 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| ||||| || ||| | || || ||||| ||||| || | |||||| ||||| Sbjct 160100 TCCAACTGTTTACCGGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 160041 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | ||| || | | | | |||||| || ||| || | ||||||||| Sbjct 160040 TGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 159981 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| || |||||||| Sbjct 159980 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 159949 >seq18 Length=238221 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| | | ||| | ||||||| | || Sbjct 147267 TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCGAGCTGC 147208 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | ||||| ||||| ||||| || | |||||| || || ||| | Sbjct 147207 TTGCCGGCAAAGATAAGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTGAATCTTG 147148 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||| | |||| || | ||||||||| || ||||| Sbjct 147147 GCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTG 147088 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 147087 AGGGTCTTGACGAAGATCTGCAT 147065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405011910801880