Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq141 499 6e-136 seq75 325 7e-84 seq85 95.1 2e-14 >seq141 Length=34748 Score = 499 bits (552), Expect = 6e-136 Identities = 1249/1875 (67%), Gaps = 77/1875 (4%) Strand=Plus/Minus Query 243741 TGAACTGGACGG-GTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||||| || || || ||| | |||||| | |||||||| | ||||||||||| Sbjct 31437 TGAACTGGATGGCGTTGGA-GGCAGGCTTGGTACGGAGGTAGTAGGTACCGGTCTTGAGA 31379 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 || | ||| ||| || |||||| | || |||| || | || | Sbjct 31378 CCCTTCTTCCATCCGTAGAAGTGCATCGAGGTGAGCT----------GACCAAAGGTGGG 31329 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919 | | || | || || |||||| ||||| |||| || ||| | | || || || Sbjct 31328 TGC-CGAA-AGGTGGATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCA 31271 Query 243920 GCCATGGTGATGAGGTCCTTCTGA--GATATCTCATACGCCGTCTTGTAGATGGGCTTGA 243977 |||||| |||| | ||||||| ||| || || ||| |||||||| | ||||| Sbjct 31270 GCCATGTCAATGATGGCCTTCTGGCTGATCTCCCAGACG--GTCTTGTACAGCTTCTTGA 31213 Query 243978 GGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037 | | ||||||| || | |||||| | || || |||| |||||| || | Sbjct 31212 TGCGGTCGGGGATGCCGGGCACGTTCTGGATGGAACCACCGTGGGCGATGATGCGGTTCT 31153 Query 244038 GCATGTTATCGTTCCACAGGCCC------AAGCGCTCCAGCGCCTCGACCAGGTGCCTGT 244091 |||| | ||||||||||| ||| | | |||| ||| | |||||| | | Sbjct 31152 TCATGGTGTCGTTCCACAGACCCTGCTCGACGAGCTC--GCGGAGCAACCAGGGG----T 31099 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 | || ||||| ||||| || | ||||| || ||| ||||| ||| | || |||| Sbjct 31098 TGACGACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATATTGGAGGTGTAAGGCT 31039 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 ||| || ||| || |||||| ||||| ||| ||||| |||||||| | | | Sbjct 31038 CGAAGCACTCGTTGAAGCCCAGGATCTGACTGGTGGAGGCAGTAGGCATGGGAGCGAGGA 30979 Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271 | || ||| | | |||||| | ||| | |||||||| ||||||||| | Sbjct 30978 GGAGCGAGTTGCGAAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAAA 30919 Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331 | |||| || ||| ||||||||||| |||| ||| |||| | Sbjct 30918 GGTTCGAGGGGG---------TGACACCCCACATGTCGTACTGGAGCTCACCCTGGGAAG 30868 Query 244332 CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCG- 244390 |||| ||| |||||||| ||||| |||| ||| ||||||| || | ||| Sbjct 30867 CGGGCGAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTCCTGAGCCAGCTCGCA-CGATCGC 30809 Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCG-CGGGCCTTGCC 244449 ||||||||||||| ||||||||||||||||||| ||| | | || || |||| | Sbjct 30808 TCGAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGACGTTGA-GACGACGAGCCTCGGG 30750 Query 244450 GCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCC 244509 | ||| | | |||||| ||||||||| ||||||| || ||||| || ||||| || Sbjct 30749 CGACTCGAAAGCGTAGCCCATGATCATGAAGGCGTCGGCGAGACCCTGGACACCGATACC 30690 Query 244510 GATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 |||||| | || ||| ||||||| | || | || | | |||||||| ||||| || Sbjct 30689 GATGGGACGATGGCGCATGTTGGACCTGCGAGCCTCCTCG-ACGGGGTAGTAGTTGATGT 30631 Query 244569 CGATCACCTTGTTGAGGTT---GCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAA 244625 |||| | |||||||||||| || | || | || ||| ||| | || ||| | Sbjct 30630 CGATGATCTTGTTGAGGTTCTTGCAGATGGCCTTGGCGACCTCGTGG---AGACGCTTGA 30574 Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685 ||||||| || || || || || | || | || | |||||||| | Sbjct 30573 AGTCGTAG--GT-------CTTGGTGACGGGG-TCG--ATGAAGGTGGGGAGGGCGATGG 30526 Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745 |||| |||||||||||| ||||| || | | |||||| || ||||||||||| | Sbjct 30525 AAGCCAAGTTGCAGACGGCGACCTCGTCGGGGGCACTGTACTCGATGATCTCGGTGCACA 30466 Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 ||| ||||||||||||||| |||| || || ||| |||| |||| ||||||| Sbjct 30465 AGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCT 30406 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865 ||||||| |||||||| || |||||| ||||| |||||| | || |||||| | Sbjct 30405 TGTAGAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATGGCGTACCAGAGCT 30346 Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 | ||||||||| || | || |||||| ||||||||||| ||| || || Sbjct 30345 TCTGAGCCTTGACAGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGACGCT 30286 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985 |||||||| ||| || ||| | || ||||||||| ||||||||||| || Sbjct 30285 CGAACTCGTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCACATGAGGGACC 30226 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 | || ||| | || ||| | || ||||||||| ||||| | ||||||||| | ||||| Sbjct 30225 AGTCACCGTTCTGCTCGACACGCTTCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGA 30166 Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 | || | | | ||| ||| || |||||| | || || | || ||||||| Sbjct 30165 GCTCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGA 30106 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 |||| |||||| ||||| ||||||| || | ||| ||||| ||||||||||| |||| Sbjct 30105 CGTCCGAGTGCCATGGCTCAATGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCT 30046 Query 245166 GGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 |||| | | | || ||| |||||||| ||| || | || || || ||||| Sbjct 30045 GGTCGA----CGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTG 29990 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281 ||||||||||| ||||||| ||| |||| | || | | |||| | Sbjct 29989 CTAACACCGTTGGTGCCGGCAATGTAGGAGCCAGTGCCACGGATGCAGTGGATGTTGAGA 29930 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | || |||||| ||||||||| | ||||||| |||||| ||||| ||||| Sbjct 29929 CCGATACCACCGGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCGTAGATGCCG 29870 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || ||| ||| ||||||| ||| || || || || || ||||| || | ||| | Sbjct 29869 TCGATGGAGTCGTCCTTCATGGTGACGAGGAAACACGACGAGAGCTGCGGGTGAGGGGTA 29810 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTAC 245461 | | |||||| || ||||| ||||||||||||||| ||| | || ||| Sbjct 29809 CCGGCGTTGAAGAGGGTGGGCGAGGCGTGGGTAAAGTACTTTTGCGACATGAGGTTGTAG 29750 Query 245462 GTCTGGAGCAGAGC-GTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGT 245520 |||| || | || | |||||| | |||||||| | |||| | |||||| | Sbjct 29749 GTCTCGA-TGGCGCTGGCGATGTCCTGACCGTGGATACCGACGGCGACACGCATGAGCAT 29691 Query 245521 GTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGC 245578 ||||||||| ||| || | || | || | ||| | ||||||||||||||| Sbjct 29690 GTGCTGGGGACGCTC--TGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGG 29633 Query 245579 GTCTTGAACCCAAAG 245593 |||||||| || ||| Sbjct 29632 GTCTTGAAGCCGAAG 29618 >seq75 Length=98333 Score = 325 bits (360), Expect = 7e-84 Identities = 521/737 (71%), Gaps = 12/737 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| ||||||||||||||| || ||||| Sbjct 63971 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAAATCGACCTC 64030 Query 42360 GCCAAGGACACGGCCGGCTGGGAGT-CACTGTCT--GAGAACGAAAAGTTTTTCCTCAAA 42416 ||||||| || |||||| || || || ||||| ||| || Sbjct 64031 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAACGACAACGAGCGTCACTTCATCTCC 64090 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || ||||||||||||||||| ||||| || ||||| |||||||| | | | Sbjct 64091 CACGTCCTCGCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTTGTCGAGCGT 64150 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| || || ||| | ||||| || ||||||||||| |||||||| || Sbjct 64151 TTCAGCTCTGAAGTTCAGGCCGCCGAGGCCCGTTGCTTCTACGGTTTCCAGATCATGATG 64210 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| | || || |||| ||||||| || |||| Sbjct 64211 GAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACCTACATCCGTGAGCCCGAG 64270 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 |||| | || || | ||| | ||||| || ||| | ||||| ||||||| ||| Sbjct 64271 CAGCGCGAGTTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAGGCTGAC 64330 Query 42657 TGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 ||||| ||| |||||| || | | | ||| | |||| |||| | || || ||||| Sbjct 64331 TGGGCTCTCCGATGGATC-AGCGACAAGCGCGCCTCTTTCGCCGAGCGTCTCGTTGCCTT 64389 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 |||| |||||||| ||||||||||| || |||||||||||||||||||||||||| | Sbjct 64390 CGCCGCTGTCGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATCTTCTGGCTCAAGAA 64449 Query 42776 G-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834 | ||| || |||||||| ||||| ||||| ||||| |||||| | ||||| || | Sbjct 64450 GCGTGGTCTC-ATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCGCGTGACGAAGGTC 64508 Query 42835 TGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA-CAAGCCCTCGAAG 42893 |||| | ||||||||||||||||| ||| |||||||||| | | | ||| | | | Sbjct 64509 TGCACACCGACTTTGCCTGCCTCCTCTTC---AGCCACCTCAAGAAGCGAGCGCAC-CCG 64564 Query 42894 GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAG 42953 || || | |||||||| ||||||||||| |||||||| | |||||||| | Sbjct 64565 GACACCGTGCTCAAAATCATCACCGAGGCCGTGGAAATCGAGAAAGCTTTCCTCACCGAC 64624 Query 42954 TCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTAC 43013 | || ||||| || || | ||||||||| | | |||||| ||||||| ||||| Sbjct 64625 GCTCTCCCCGTATCTTTGATTGGCATGAACTCGAAATTGATGTGCCAGTACATAGAGTAC 64684 Query 43014 GTCGCCGACCATCTCCT 43030 || || |||| ||| || Sbjct 64685 GTGGCTGACCGTCTGCT 64701 >seq85 Length=85907 Score = 95.1 bits (104), Expect = 2e-14 Identities = 146/202 (72%), Gaps = 10/202 (5%) Strand=Plus/Minus Query 242948 GTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCT-GCTCAACAAGA 243006 ||| || || |||||||| | || || |||||||||||||| ||||| |||| | | | Sbjct 10558 GTTTCCAGAGAGGACCACGGCTATTGGCCAGATGATCAACTCCTACCTCGCTC-AGACTA 10500 Query 243007 GCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAA---GCCG 243063 | ||||| |||||||| | | | |||||||| ||||| |||||||| |||||| | || Sbjct 10499 GTGATCTCGACGATCAAGCCATCCACCTCCTCTTCTCCGCCAACCGCTGGGAATGCGTCG 10440 Query 243064 CCTCCGACCTGAAGCGCAAGCT-GATGAAGGGTACCACCATCGTGCTCGACCGCTACGCG 243122 | ||| | ||| | ||| |||| ||| | | |||||| |||||| ||||| Sbjct 10439 CTTCCATCAAAAAG---ACGCTCGATGCAGGCGA-GAGCATCGTCTGCGACCGATACGCC 10384 Query 243123 TTCTCCGGCGTAGCCTTCACGG 243144 || || ||| | || | | ||| Sbjct 10383 TTTTCGGGCATCGCATACTCGG 10362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944157273053120