Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq29 84.2 2e-11 >seq29 Length=185255 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/203 (70%), Gaps = 7/203 (3%) Strand=Plus/Minus Query 99159 GGCCAGGACCCCTATCACGGG---GGTCAAGCAAACGGCCTGGCATTCAGCATCGCATAC 99215 || ||||| ||||| ||||| |||||||| ||| ||| | |||||| || | | Sbjct 69805 GGTCAGGATCCCTACCACGGCCCTGGTCAAGCTTGCGGGCTGTCGTTCAGCGTCCCGAAA 69746 Query 99216 GGCTTTCCAGTcccccccAGCCTGAGGAACATCTACGCGGAGCTG-CACCGGAGTCTGCC 99274 ||| ||| ||||| || || | |||||||||| ||||||| | | || | | | Sbjct 69745 GGCGTTCGTGTCCCACCGTCGCTCAAGAACATCTACAAGGAGCTGGCTACCGAATATCC- 69687 Query 99275 GGAGTTTTCTCCCCCAGA-TCACGGCTGTCTAGACGCGTGGGCCTCCCAGGGGGTGTTGC 99333 || || | | | | || ||||||||||||||||| |||||| ||||| ||| ||| Sbjct 69686 -GACATTCCGCACACCGAGTCACGGCTGTCTAGACGGATGGGCCAAGCAGGGCGTGCTGC 69628 Query 99334 TACTCAACACCATCCTGACCGTG 99356 | |||||| | |||||| ||| Sbjct 69627 TGCTCAACGCGTGCCTGACGGTG 69605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552610319108480