Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 1e-12 >seq2 Length=407147 Score = 89.7 bits (98), Expect = 1e-12 Identities = 241/366 (66%), Gaps = 2/366 (1%) Strand=Plus/Plus Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144 |||||||| |||||||||| | ||| || ||||| | || || ||| | || Sbjct 60827 ACGATAGGGGTGATGAACTCGACGAGGAAACCCGGAATCTTGAGCAGCGACGGGTAGAAG 60886 Query 298145 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 298204 | || ||||| |||| |||||| ||||| | ||||| |||| |||||| Sbjct 60887 TGGTCGAGGAAGTTGATGATGAGACCCTTGATGTGCGAACCGTCGTGATCCTGATCGGTC 60946 Query 298205 ATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGA 298264 |||||||| | | ||||| || || | | ||| ||| || ||| || Sbjct 60947 ATGATCATGATACTGCCGTATCGCAGACTGTTCACGTCGAGATACTGCTTGCCGTGCTGG 61006 Query 298265 AGGCCGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG-GA 298323 || || | || | |||| ||| ||||||| |||||||| |||| || | | | || Sbjct 61007 AGACCCAAGATCTCCTTGATGGCTTTGATTTCGGCGTTCTTCATGAT-CTGGTCGTGCGA 61065 Query 298324 TGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACC 298383 || || ||||| ||||| || || ||||| || ||||| || ||||| | || | || Sbjct 61066 GGCTTCACGGACGTTCAAGAGCTTACCACGGAGCGGGAAGACACCATAGTTGTCTCTTCC 61125 Query 298384 GACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAG 298443 |||| || | || |||| || || | | ||||| || || || || || ||||| Sbjct 61126 GACCTCGACAATACCGGCGACAGCGAGCGACTTGGCGGAGTCACCTTCGGTGAGGATGAG 61185 Query 298444 AGTGCA 298449 ||||| Sbjct 61186 TGTGCA 61191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102662218422200