Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq141 403 2e-107 >seq141 Length=34748 Score = 403 bits (446), Expect = 2e-107 Identities = 1130/1718 (66%), Gaps = 46/1718 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | | ||| | |||||| || || ||| || ||||||||| || | |||| | Sbjct 29610 TACAACTTCTTCGGCTTCAAGACCCTCGAGCGCTCCTACCTCCTCCGCATCAACGGCAAG 29669 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | ||||| || || || |||| ||||| |||||| |||| || ||||| || ||| Sbjct 29670 GTCGCAGAGCGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGTCAGGAC 29729 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | | | | | | | || |||| | | ||| | |||| ||| | Sbjct 29730 ATCGCCAGCGCCATCGAGACCTACAACCTCATGTCGCAAAAGTACTTTACCCACGCCTCG 29789 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||||| |||||||| || ||||| || ||| | || ||||||||||| | || Sbjct 29790 CCCACCCTCTTCAACGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGTTTCCTCGTCACC 29849 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| |||||||||| ||| || | ||||| |||||| ||| || | ||||| Sbjct 29850 ATGAAGGACGACTCCATCGACGGCATCTACGACACGCTCAAGACCTGCGCCATGATCTCC 29909 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || ||| || || ||||| ||| ||||| | | |||| || || |||||||| Sbjct 29910 AAGACCGCCGGTGGTATCGGTCTCAACATCCACTGCATCCGTGGCACTGGCTCCTACATT 29969 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 ||| ||||| || |||||| |||| || |||||||| |||||||||||| | Sbjct 29970 GCCGGCACCAACGGTGTTAGCAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACC 30029 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || |||||||| ||||||||||| | | | ||| | || || |||| | ||| Sbjct 30030 GCCCGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTACATTGAG 30089 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| ||||||| | ||| ||||||| || ||||||||||| || || | Sbjct 30090 CCATGGCACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGTAAGGAGGAG 30149 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | || | || ||||||||||| |||||||| || || || || ||||| || ||| Sbjct 30150 GTTCGTGCTCGTGAGCTCTTCTACGCCCTCTGGGTTCCCGATCTCTTCATGAAGCGTGTC 30209 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 ||| | ||| | |||| || | || ||||| || || ||||| || ||||| Sbjct 30210 GAGCAGAACGGTGACTGGTCCCTCATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTGC 30269 Query 94378 TGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGA 94435 | || || || || || | | || | || ||||| | ||||| |||| | Sbjct 30270 TACGG--CGACGAGTTCGAGCGTCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCAAGC 30327 Query 94436 AGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTA 94495 | | | ||| |||||| ||| | ||| | || ||| ||||| |||| Sbjct 30328 GCACTGTCAAGGCTCAGAAGCTCTGGTACGCCATCCTCGAGTCCCAGACCGAGACTGGTA 30387 Query 94496 CGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGG 94555 |||| |||| | | ||||||| ||| |||| |||| ||||||| || ||||||| Sbjct 30388 ACCCCTTCATCCTCTACAAGGACGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCA 30447 Query 94556 TGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTG 94615 |||||| |||| || ||||||||||||| ||||||| | | | || |||||| | | Sbjct 30448 CCATCAAGTGCTCCAACTTGTGCACCGAGATCATCGAGTACAGTGCCCCCGACGAGGTCG 30507 Query 94616 CTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA----GATGCCTACACG 94671 | || || ||| ||| |||||| ||| |||| ||| | ||| | || | || Sbjct 30508 CCGTCTGCAACTTGGCTTCCATCGCCCTCCCCACCTTCAT-CGACCCCGTCACCAAGAC- 30565 Query 94672 TCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG--ATGGTCTTGA 94729 |||| |||| || ||| | ||| | || |||| || | || Sbjct 30566 -CTACGACTTCAAGCG-TCTCCACGAGGT-----------CGCCAAGGCCATCTGCAAGA 30612 Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789 |||| |||| | | ||||||| |||| |||||||||| |||||| | || ||| Sbjct 30613 ACCTCAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAGGCTCGCAGGTCCAACA 30672 Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849 || ||||| |||||||| ||||| ||||||||| |||| ||||| | |||| ||| Sbjct 30673 TGCGCCATCGTCCCATCGGTATCGGTGTCCAGGGTCTCGCCGACGCCTTCATGATCATG- 30731 Query 94850 GTCTGC-CCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 | || | | | ||| || ||| || || | || | | || ||||| | ||| Sbjct 30732 GGCTACGCTTTCGAGTCGCCCGAGGCTCGTCGTCTCAACGTCCAGATCTTCGAGACCATC 30791 Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCACACGA 94967 || ||| ||| | | | ||| | | |||| || ||| ||| | |||| Sbjct 30792 TACCACGCCGCCCTCGAGCGATCGTGCGAGCTGGCTCA----GGAGCACGGCACCTACGA 30847 Query 94968 ATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAA 95027 | | | ||| |||||| ||||| | |||| |||| | |||||||| | Sbjct 30848 GACCTACGCCGGCTCGCCCGCTTCCCAGGGTGAGCTCCAGTACGACATGTGGGGTGTCAC 30907 Query 95028 GCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGATGTTATCAAACACGGTGTG 95085 |||||| || | ||||||| ||||| | || || | ||| |||||| | Sbjct 30908 CCCCTCGAACCTTTGGGACTGGGCCGAGCTCAAGGCCAAGA--TCGCCAAGCACGGTCTT 30965 Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 ||| |||| || | || |||||||| || |||||||| |||||||| ||| | Sbjct 30966 CGCAACTCGCTCCTCCTCGCTCCCATGCCTACTGCCTCCACCAGTCAGATCCTGGGCTTC 31025 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 ||||||| ||||| || | ||||||||| | ||| | || ||||||||||| || Sbjct 31026 AACGAGTGCTTCGAGCCTTACACCTCCAATATCTACTCGCGTCGTGTGCTCGCCGGTGAG 31085 Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGTGGGGTG 95263 |||| ||| ||||| | || || || || |||| | |||| ||||| | Sbjct 31086 TTCCAGGTCGTCAACCCCTGGTTGCTCCGCGAGCT--CGTCGAGCAGGGTCTGTGGAACG 31143 Query 95264 ACAAGGTCAAGAACCAACTGCTACGCGCCAAC---GGCTCCGTCCAGAACATCCCGCAAA 95320 ||| | ||||||| | | |||| || || ||| |||||||| | || | Sbjct 31144 ACACCATGAAGAACCGCATCAT---CGCCCACGGTGGTTCCATCCAGAACGTGCCCGGCA 31200 Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATAC 95380 | || || ||||||| ||| ||||||||||| ||||||||| ||| | || Sbjct 31201 TCCCCGACCGCATCAAGAAGCTGTACAAGACCGTCTGGGAGATCAGCCAGAAGGCCATCA 31260 Query 95381 TCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 | ||| || |||| ||| || | |||||||||||| Sbjct 31261 TTGACATGGCTGCCGACCGTGGTGCTTTCATCTGCCAG 31298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494627891575520