Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq16 95.1 9e-15 seq91 89.7 4e-13 >seq16 Length=261230 Score = 95.1 bits (104), Expect = 9e-15 Identities = 111/150 (74%), Gaps = 4/150 (3%) Strand=Plus/Minus Query 118178 TCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACT 118237 ||| || ||||| || | ||| |||| ||||| || ||||| ||||| |||| || | Sbjct 6854 TCCATCTCGACCCGCACGGCCTGTCTCCTGATAGTAGCCGTCGAGTGACTTGGAAATGCA 6795 Query 118238 GTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGA 118297 | ||| ||||| || |||||||| || || ||||||||||| ||||| || ||||| | Sbjct 6794 GGCATGAATCACAAAGCGCACGTCTGGCTTGTCGATGCCCATTCCGAATGCGATCGTAGC 6735 Query 118298 ACATATCACTCGG----GTCTCGTTCGCCA 118323 || | |||| || | | ||||||||| Sbjct 6734 GCAAACCACTTGGATCCGACCCGTTCGCCA 6705 >seq91 Length=77995 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118176 TTTCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATA 118235 || |||||||||||||| | || |||| ||||| ||||| |||| || ||||||| Sbjct 67148 TTGCCGTCGCGACCGGCTCGGCCGGTCTCCTGATAGTAACCCTCCAAGGACTTGGGCAGC 67207 Query 118236 CTGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGT 118294 |||||| || || || |||||||| || || ||||| ||||| || || || ||||| Sbjct 67208 GAGTGATGGATGACGAAGCGCACGTCCGGCTTGTCGATACCCATGCCAAAGGCGATCGT 67266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381701090183328