Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20iseilematis-
ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq27 104 2e-17
>seq27
Length=198227
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | ||| || || || || || |||||||| || || || || |||
Sbjct 160406 ATACCACCACGAAGTCGCAAGACAAGGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCG 160347
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || | ||| ||||||||| | || | ||||||||||| ||
Sbjct 160346 GAAAGGGTGCGGCCATCCTCGAGTTGCTTTCCTGCGAAAATGAGACGTTGCTGGTCAGGG 160287
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|||||||| || || || || || || |||| || | || | |||||| || || ||
Sbjct 160286 GGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGTTGTCGATGGTGTCCGAGGATTC 160228
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||||||| | || |||||||| | || || ||||| || |||||
Sbjct 160227 AACTTCGAGAGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 160177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451916121583520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |