Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq141 143 4e-29 seq75 140 5e-28 >seq141 Length=34748 Score = 143 bits (158), Expect = 4e-29 Identities = 329/489 (67%), Gaps = 16/489 (3%) Strand=Plus/Minus Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908 |||||||| |||||||| ||||||| || | | || ||||| | |||||||| || Sbjct 31438 GTGAACTGGATGGCGTTGGAGGCAGGCTTGGTACGGAGGTAGTAGGTACCGGTCTTGAGA 31379 Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968 ||||||| ||| ||||| | |||||| || | || | | | | |||| | | | | Sbjct 31378 CCCTTCTTCCATCCGTAGAAGTGCATCGAGGTGAGCTGACCAAAGGTGGGTGCCGAAAGG 31319 Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATA 204028 || ||||| || ||||| ||| |||||||| | || || || ||||| | || Sbjct 31318 TGGATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCAGCCATGTCAATG 31259 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGAGGCAC 204087 |||| |||||| |||||||| || |||||| ||| | ||| || || | | || | Sbjct 31258 ATGGCCTTCTGGCTGATCTCCCAGACGGTCTTGTACAGCTTCT-TGATGCGGTCGGGGA- 31201 Query 204088 ATCTTCC---CACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTC---TCATCCTCGTCT 204140 | || ||||| ||| || || || || ||| || | | || || | || | Sbjct 31200 ---TGCCGGGCACGTTCTGGATGGAACCACCGTGGGCGATGATGCGGTTCTTCATGGTGT 31144 Query 204141 CCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAA 204200 | | || ||| ||| | || ||||| || | || |||||||| || ||| | Sbjct 31143 CGTTCC---ACAGACCCTGCTCGACGAGCTCGCGGAGCAACCAGGGGTTGACGACCTGGA 31087 Query 204201 AGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGT 204260 | || |||| ||||| | || | | | | ||| |||| | || ||||| ||||| Sbjct 31086 ACTCACCGGCGAGCACACGACGCGAGTAGATATTGGAGGTGTAAGGCTCGAAGCACTCGT 31027 Query 204261 TGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGC 204320 || ||| | |||||| |||| ||| || ||||||||||| ||||| || ||||||| Sbjct 31026 TGAAGCCCAGGATCTGACTGGTGGAGGCAGTAGGCATGGGAGCGAGGAGGAGCGAGTTGC 30967 Query 204321 GCACACCGT 204329 | | ||||| Sbjct 30966 GAAGACCGT 30958 >seq75 Length=98333 Score = 140 bits (154), Expect = 5e-28 Identities = 185/254 (73%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || |||||||| ||||||||| |||||| || ||||| || ||||||| ||||||||| Sbjct 64536 AAGAGGAGGCAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAGATGAGCTCGTTGGAG 64477 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | |||| || ||||||| |||||| |||||||| || |||| || || | |||| Sbjct 64476 AAAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCG 64417 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| ||||| || || || || || ||||| | ||| | ||||||||| Sbjct 64416 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAACGAGACGCTCGGCGAAAGAGGCGCGC 64357 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCT--TTG-CGATGCACGGCATGCGC 160150 |||| | |||| | ||||| |||||||||| ||| ||| | || ||| | Sbjct 64356 TTGTCGCTGATCCATCGGAGAGCCCAGTCAGCCTTCTGCTTGACGACG---GGGATGGTC 64300 Query 160151 TCGACGGCGTTAAA 160164 |||||||||| ||| Sbjct 64299 TCGACGGCGTCAAA 64286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795002013350720