Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq141 435 6e-117 seq75 232 1e-55 >seq141 Length=34748 Score = 435 bits (482), Expect = 6e-117 Identities = 1190/1807 (66%), Gaps = 79/1807 (4%) Strand=Plus/Minus Query 212688 AGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCT 212747 || || | ||| || ||||| |||| ||||| | | | ||| || |||||||| Sbjct 31321 AGGTGGATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCAGCCATGTCA 31262 Query 212748 ATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGG 212807 ||||| | ||||| || |||||| ||||||||| | | | |||| | || ||| Sbjct 31261 ATGATGGCCTTCTGGCTGATCTCCCAGACGGTCTTGTACAGCTTCTTGATGCGGTCGGGG 31202 Query 212808 AAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG--CATGTCCT 212865 | |||||| | |||||| | || || | ||| | | | ||| | |||| | Sbjct 31201 ATGCCGGGCACGTTCTGGATGGAACCACCGTGGGCGATGA--TGCGGTTCTTCATGGTGT 31144 Query 212866 CGTTCCAGAGGCCCCTGGTCTCCAGGCACTTG-----ACCAGGTGAGGGTTGACTATCTG 212920 ||||||| || ||| || || | || | | |||||| ||||||| | ||| Sbjct 31143 CGTTCCACAGACCC-TGCTCGACGAGCTCGCGGAGCAACCAGG----GGTTGACGACCTG 31089 Query 212921 GAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTC 212980 ||| ||||| | |||||| | | | ||| | || || ||||| ||||||| || ||| Sbjct 31088 GAACTCACCGGCGAGCACACGACGCGAGTAGATATTGGAGGTGTAAGGCTCGAAGCACTC 31029 Query 212981 GTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTT 213040 |||| ||||| ||||| ||| ||| || ||||||||||| | ||||| ||| Sbjct 31028 GTTGAAGCCCAGGATCTGACTGGTGGAGGCAGTAGGCATGGGAGCGAGGAGGAGCGAGTT 30969 Query 213041 CCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAG 213100 | | ||||||| | |||| | | ||||| ||||||||||| || Sbjct 30968 GCGAAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAA---------AG 30918 Query 213101 GTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCC 213160 || | | | || ||||||||| |||| | || | | |||| ||| Sbjct 30917 GTTCGAGGGGGTGACACCCCACATGTCGTACTGGAGCTCACCCTGGGAAGCGGGCGAGCC 30858 Query 213161 CTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGC 213220 ||| | ||||| ||| ||||||| ||||||||||| || || ||||| || Sbjct 30857 GGCGTAGGTCTCGTAGGTGCCGTGCTCCTGAGCCAGCTCGCACGATCGCTCGAGGGCGGC 30798 Query 213221 GTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGG 213280 || ||||||||| || || |||| |||||| ||||| || ||| ||| | Sbjct 30797 GTGGTAGATGGTCTCGAAGATCTGGACGTTGAGACGACGAGCCTCGGGCGACTCGAAAGC 30738 Query 213281 ------CATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGG 213334 ||| |||||| || | || || || |||||||| ||||| |||||||| Sbjct 30737 GTAGCCCATGATCATG------AAGGCGTCGGCGAGACCCTGGACACCGATACCGATGGG 30684 Query 213335 TCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGA 213393 | || | || ||| ||| || |||| |||||| | |||||| ||||| |||||||| Sbjct 30683 ACGATGGCGCATGTTGGACCTGCGAGC-CTCCTCGACGGGGTAGTAGTTGATGTCGATGA 30625 Query 213394 TCTTGTTGAGGTT---GCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGA 213450 ||||||||||||| || | ||||| |||| ||| | | || || | |||| Sbjct 30624 TCTTGTTGAGGTTCTTGCAGATGGCC---TTGGCGACCTCGTGGAG--ACGC----TTGA 30574 Query 213451 ACACGTAGCCCC------CGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGC 213504 | ||||| | || | | || || ||||||||| |||| ||||| Sbjct 30573 AGTCGTAGGTCTTGGTGACGGGGTCGATGAAGGTGGGGAGGGCGATGGAAGCCAAGTTGC 30514 Query 213505 AAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATC 213564 | ||||| ||||| | | | | ||||||| |||||||||||||||| |||| ||| Sbjct 30513 AGACGGCGACCTCGTCGGGGGCACTGTACTCGATGATCTCGGTGCACAAGTTGGAGCACT 30454 Query 213565 GGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGT 213624 ||||||||| ||||||| ||||| ||| |||||||| ||||||||||| ||| Sbjct 30453 TGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCTTGTAGAGGATGA 30394 Query 213625 AGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGA 213684 ||||| || ||||| ||||||| | || || | |||||| | | ||||||| Sbjct 30393 AGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATGGCGTACCAGAGCTTCTGAGCCTTGA 30334 Query 213685 CCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCG 213743 | ||| || || ||| | | |||||||| | |||||||| | ||| ||| Sbjct 30333 CAGTGCGCTTGGCA----CGGCCCTCGGCCTCGTAGCGCTCGTAGAGACGCTCGAACTCG 30278 Query 213744 TGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG 213803 | ||| || | | || || || || ||| ||||||||| |||||| ||| Sbjct 30277 TCGCCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCACATGAGGGACCAGTCACCG 30218 Query 213804 -TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCT 213862 || ||| ||| | || |||||| || || || ||||| || ||| ||| || || | Sbjct 30217 TTCTGCTC-GACACGCTTCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGAGCTCACG 30159 Query 213863 GGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGC 213922 | | ||| ||| || ||| ||||| || || || || ||||||| ||||| Sbjct 30158 AGCACGAACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGA 30099 Query 213923 GTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCAC 213979 |||||| ||||| ||||||||||||||||| || | || | ||||| |||||||| || Sbjct 30098 GTGCCATGGCTCAATGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGAC 30039 Query 213980 CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTT 214039 | ||| ||||||||| ||| || | ||| || | |||||| ||||| Sbjct 30038 GTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTGCTAACACCGTT 29979 Query 214040 GGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACC 214099 ||| || || || || ||||| | | | | | | | ||| ||| || || ||||| Sbjct 29978 GGTGCCGGCAATGTAGGAGCCAGTGCCACGGATGCAGTGGATGTTGAGACCGATACCACC 29919 Query 214100 GGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTC 214159 |||| ||||||||||||||||||| | | | || || ||||||| | ||| ||| Sbjct 29918 GGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCGTAGATGCCGTCGATGGAGTC 29859 Query 214160 ATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAA 214219 || | | | | | | ||| || ||||||||| || | | || | |||||| Sbjct 29858 GTCCTTCATGGTGACGAGGAAACACGACGAGAGCTGCGGGTGAGGGGTACCGGCGTTGAA 29799 Query 214220 AAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGAC 214279 || ||||| ||| ||| | | |||| | || | ||| |||||||||| | | | Sbjct 29798 GAGGGTGGGCGAGGCGTGGGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCGATGGC 29739 Query 214280 TGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCT 214339 || |||||| || |||||| | ||| | ||| |||||||||||||| | Sbjct 29738 GCTGGCGATGTCCTGACCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGGACG 29679 Query 214340 CTCTATGGGTCCTTTGGGGCCCTT------GAGCAGGTAGGAGCGCTCCAGAGTCTTGAA 214393 ||| || | |||| ||| || ||| |||||||||||||| || |||||||| Sbjct 29678 CTC--TGCGACCTT----GCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGGGTCTTGAA 29625 Query 214394 CCCAAAGTAGGAGTAG-GTATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTCTTCCG 214452 || ||| || |||| | | | || | ||| |||| ||| | ||| |||| ||| Sbjct 29624 GCCGAAGAAGTTGTAGTGGAAG-TCACGCTCGTAGATGATGGCCGAGTCGAGCTGGTCCT 29566 Query 214453 CGTGCTC 214459 |||||| Sbjct 29565 TGTGCTC 29559 >seq75 Length=98333 Score = 232 bits (256), Expect = 1e-55 Identities = 388/559 (69%), Gaps = 9/559 (2%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | |||||||||||| |||||| |||||||| || ||||||| ||||||||| Sbjct 64535 AGAGGAGGCAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAGATGAGCTCGTTGGAGA 64476 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | |||||| ||||||| || | || ||||||||||| || | ||||| || || | Sbjct 64475 AAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCGG 64416 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||||||| ||||| || || ||||| || ||| | ||| ||||||| ||| || Sbjct 64415 AGAAGAAGATACCCTCGACAGCGGCGAAGGCAACGAGACGCTCGGCGAAAGAGGCGCGCT 64356 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| |||||| || |||||||| ||||||| ||||| | || || ||||| | Sbjct 64355 TGTCGCTGATCCATCGGAGAGCCCAGTCAGCCTTCTGCTTGACGACGGGGATGGTCTCGA 64296 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCT 48419 ||| ||||| || || || | | || | ||||| |||| ||| Sbjct 64295 CGGCGTCAAAGAGGAACTCGCGCTGCTCGGGCTCACGGATGTAGGTGTCGATGAGGAGC- 64237 Query 48420 TTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGG 48479 | ||| |||| ||||| | ||||| || ||||||||| ||||||||| | || Sbjct 64236 --GAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGGG 64179 Query 48480 CCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCAT 48539 |||| |||| ||||| | | ||| | ||| | || ||||| ||||| || || | Sbjct 64178 CCTCGGCGGCCTGAACTTCAGAGCTGAAACGCTCGACAAGGTTCTCGTTGACGATACCGT 64119 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAG 48599 | || || || |||||||| ||||| || | ||| || |||||||||| | |||| Sbjct 64118 CGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCGTTGTCGTTGAGCT 64059 Query 48600 CATT---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656 || |||| | || | || ||| ||||| | ||| || | ||||||||||| | Sbjct 64058 TGTTGTCCCAGTCGTGGAGATCCTTGGAGAGGTCGATTTCCTCGGCGGTCCAGAAGGAAG 63999 Query 48657 CGAGTGCTTTTTTGTACAT 48675 | || || |||||||| Sbjct 63998 CCTCGGCCTTCTTGTACAT 63980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931353340206080