Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq141 197 2e-45 seq75 141 1e-28 >seq141 Length=34748 Score = 197 bits (218), Expect = 2e-45 Identities = 905/1418 (64%), Gaps = 27/1418 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| ||||| |||| |||||||| | ||||| | | | Sbjct 29682 CCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGTCAGGACATCGCCAGCGCC 29741 Query 75272 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || ||||| ||| ||| || | ||||| | || |||||||| Sbjct 29742 ATCGAGACCTACAACCTCATGTCGCAAAAGTACTTT-ACCCACGCCTCGCCCACCCTCTT 29800 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || ||||| || |||||| | || || ||||| || ||| ||||| || Sbjct 29801 CAACGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGTTTCCTCGTCACCATGAAGGACGA 29860 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| ||| |||| ||||| | || || | | || || ||||| ||| || || Sbjct 29861 CTCCATCGACGGCATCTACGACACGCTCAAGACCTGCGCCATGATCTCCAAGACCGCCGG 29920 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || | ||||||| | | | || | || ||| || || || Sbjct 29921 TGGTATCGGTCTCAACATCCACTGCATCCGTGGCACTGGCTCCTACATTGCCGGCACCAA 29980 Query 75511 TGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 ||| | || | ||||| |||| ||||| ||||| || ||| ||| || ||||| | Sbjct 29981 CGGTGTTAGCA-ACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTACG 30039 Query 75570 TAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 | | || | || ||||| | || || | || ||||| | || ||||||| Sbjct 30040 TCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACATTGAGCCATGGC 30096 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 | | || || | |||||||| || | || ||||| ||| | || |||| ||| Sbjct 30097 ACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGTAAGGAGGAGGTTCGTG 30156 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | || ||||| | |||| ||| |||| || || ||||||||||| || ||| || Sbjct 30157 CTCGTGAGCTCTTCTACGCCCTCTGGGTTCCCGATCTCTTCATGAAGCGTGTCGAGCAGA 30216 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 ||| | ||||| || | || || || || || |||||| ||||| || | Sbjct 30217 ACGGTGACTGGTCCCTCATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTGCTACGGCG 30276 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG-ACTGTA 75862 | ||||| || |||||| || || | ||||| | ||||| ||| ||||| Sbjct 30277 ACGAGTTCGAGCGTCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCAA-GCGCACTGT- 30334 Query 75863 CCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | || | | || | | ||| | || || ||| | || ||||| |||||||| | || | Sbjct 30335 CAAGGCTCAGAAGCTCTGGTACGCCATCCTCGAGTCCCAGACCGAGACTGGTAACCCCTT 30394 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 || || |||||||| ||| ||| ||||| ||||| ||||| | || || ||||| Sbjct 30395 CATCCTCTACAAGGACGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCAA 30454 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | |||| || | ||||| || || | ||||||| | || ||| || || || Sbjct 30455 GTGCTCCAACTTGTGCACCGAGATCATCGAGTACAGTGCCCCCGACGAGGTCGCCGTCTG 30514 Query 76042 CAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTA 76101 ||| ||||| || |||||||| || | | || | | || || | || | Sbjct 30515 CAACTTGGCTTCCATCGCCCTCCCCACCTTCATCGACCCCGTCACCAAGACCTACGACTT 30574 Query 76102 TGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAG 76161 | || || || || | ||| | ||| || || ||| |||| |||| Sbjct 30575 CAAGCGTCTCCACGAGGTCGCCAAGGCCATCTGCAAGAACCTCAACAAGATCATCGACAT 30634 Query 76162 AAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTT 76221 || | || ||||| ||| || || | ||| || ||||| || | || || ||| | Sbjct 30635 CAACTACTACCCCGTCGAGGAGGCTCGCAGGTCCAACATGCGCCATCGTCCCATCGGTAT 30694 Query 76222 GGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGA 76281 ||||| || |||||||| || | || || | ||||||| || || || || Sbjct 30695 CGGTGTCCAGGGTCTCGCCGACGCCTTCATGATCATGGGCTACGCTTTCGAGTCGCCCGA 30754 Query 76282 AGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGA- 76340 || | || | | ||||| || ||||| || ||||| |||| || |||| Sbjct 30755 GGCTCGTCGTCTCAACGTCCAGATCTTCGAGACCATCTACCACGCCGCCCTCGA-GCGAT 30813 Query 76341 GTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCC 76400 || || ||||| | | || || |||| ||||| | | || || ||||| |||| Sbjct 30814 CGTGCGAGCTGGCTCAGGAGCACGGCACCTACGAGACCTACGCCGGCTCGCCCGCTTCCC 30873 Query 76401 AAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTC-AAC---TACGACTGG 76456 | || | ||| |||| || |||||| |||| ||| ||| ||| | |||||| Sbjct 30874 AGGGTGAGCTCCAGTACGACATGTGG---GGTGTCACC-CCCTCGAACCTTTGGGACTGG 30929 Query 76457 GATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCA 76516 | | ||||||| ||| || | |||||||| ||| || | | || || Sbjct 30930 GCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTTCGCAACTCGCTCCTCCTCGCTCCC 30989 Query 76517 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACA 76576 ||||| || ||||||||| || ||| |||| || || ||||| || || ||||| Sbjct 30990 ATGCCTACTGCCTCCACCAGTCAGATCCTGGGCTTCAACGAGTGCTTCGAGCCTTACACC 31049 Query 76577 ACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTT 76614 | || |||||| | | | ||||| |||||||| Sbjct 31050 TCCAATATCTACTCGCGTCGTGTGCTCGCCGGTGAGTT 31087 >seq75 Length=98333 Score = 141 bits (156), Expect = 1e-28 Identities = 301/439 (69%), Gaps = 8/439 (2%) Strand=Plus/Plus Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 ||| ||||||||||| || |||| || || ||| |||||||||||||||||||| || Sbjct 64363 CTCTTTCGCCGAGCGTCTCGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCCGGTTC 64422 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 ||| | | || | ||| | |||||||| ||||||||||| || || ||||| || Sbjct 64423 CTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACTTTCTCCAA 64482 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCA-AGA 65245 || || || || || || || ||||| ||| || |||||| ||||||| | Sbjct 64483 CGAGCTCATCTCGCGTGACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTCAGCCA 64542 Query 65246 CTTTGCGTAATAGA-CCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304 | | | || || | ||| | || || | | | ||| | | ||||| || || Sbjct 64543 CCTCAAG-AAGCGAGCGCAC-CCGGACACCGTGCTCAAAATCATCACCGAGGCCGTGGAA 64600 Query 65305 ATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTA-ATCTCATCGGTATGAACTCTGA 65363 || ||||||| ||| || ||||| ||||| ||| | | || || |||||||| | Sbjct 64601 ATCGAGAAAGCTTTCCTCACCGACGCTCTCCC-CGTATCTTTGATTGGCATGAACTCGAA 64659 Query 65364 GAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCC 65423 ||||| | ||||||| ||||| ||| | || ||||| || |||| || Sbjct 64660 ATTGATGTGCCAGTACATAGAGTACGTGGCTGACCGTCTGCTTGTTTCGCTTGGAAACCC 64719 Query 65424 -ACCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGA 65482 ||||| | ||| | || || |||||||| ||||||||||| || ||| | || | Sbjct 64720 GGTCCATTACG-GCGCCAGCAACCCCTTTGACTTCATGGAAAACATAAGTCTTCAAGGAA 64778 Query 65483 AGACCAACTTCTTTGAGAA 65501 ||||||||||||| ||||| Sbjct 64779 AGACCAACTTCTTCGAGAA 64797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596454670866560