Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq24 145 6e-30 >seq24 Length=202738 Score = 145 bits (160), Expect = 6e-30 Identities = 218/310 (70%), Gaps = 0/310 (0%) Strand=Plus/Plus Query 34313 TGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCAT 34372 |||| |||||||| ||||| | || || || | ||||||||| ||| ||||| | Sbjct 108948 TGAGGTCAGTCTCGGGGTTCTTGCAGTCACCGCAAAGGACAAACTTGTCGATAAAACCGT 109007 Query 34373 CAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTT 34432 | ||||| || | | ||| ||||| | ||||||||||||| |||| ||||| | Sbjct 109008 CGAGCAGCTCTCGAAGACGGTCGGCATCGTGAGCGCCGTTGACGATGTATCGGTCGTTCT 109067 Query 34433 TGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGG 34492 | | |||| | || || || || |||||||| |||||| |||| |||||||| | | Sbjct 109068 TCTCGTCGAACGAGGTCTGAGCACCGAGCTCGCAGCCGAAGAACTTGGTCGGGTACGTCG 109127 Query 34493 CCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGT 34552 ||||| | || | || || |||| ||||||| |||||| |||||||| || | Sbjct 109128 GGGGACGGCTGAGGGAACGAGCAATGTCGGACATGTTGGGGATGACGGTCTTGATACCAT 109187 Query 34553 TGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCG 34612 ||||||| || |||| ||| | || | | ||||| ||| ||||||||| ||| Sbjct 109188 TGCCCTTGCCCTCGATCTTTGTCTGGAGGAGAGGCATGCGGTATCGGTAGAACTTGTCGT 109247 Query 34613 CCACATTGCG 34622 | |||| ||| Sbjct 109248 CGACATCGCG 109257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412764054414116