Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq141 185 1e-40 seq75 185 1e-40 seq43 161 2e-33 seq13 145 1e-28 seq6 134 2e-25 seq16 93.3 7e-13 seq25 89.7 8e-12 >seq141 Length=34748 Score = 185 bits (204), Expect = 1e-40 Identities = 344/505 (68%), Gaps = 15/505 (3%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||| || |||| ||| ||||||||||||||||| || | |||||| Sbjct 30047 CTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTGCT 29988 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | ||||||||||| || | ||||| ||| | | | || | ||| | | || Sbjct 29987 AACACCGTTGGTGCCGGCAATGTAGGAGCCAGTGCCACGGATGCAGTGGATGTTGAGACC 29928 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || ||||| | ||||||||| | ||||| | || ||||| ||||||||||| || Sbjct 29927 GATACCACCGGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCGTAGATGCCGTC 29868 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| |||||| |||||||| | || || ||||||||| |||||| | | || || Sbjct 29867 GATGGAGTCGTCCTTCATGGTGACGAGGAAACACGACGAGAGCTGCGGGTGAGGGGTACC 29808 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||| |||||||| ||||||| || || | ||| ||| |||||| | |||||| Sbjct 29807 GGCGTTGAAGAGGGTGGGCGAGGCGTGGGTAAAGTACTTTTGCGACATGAGGTTGTAGGT 29748 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 ||| ||| || | ||| || ||| | ||| |||| |||||| Sbjct 29747 CTCGATGGCGCTGGCGA---TGTCCTGACCGTGG--------ATA----CCGACGGCGAC 29703 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959 ||||||| ||||| |||||| ||||| |||| | || | | |||||||| Sbjct 29702 ACGCATGAGCATGTGCTGGGGACGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGA 29643 Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019 || |||||| | ||| ||| | |||| | ||| ||||||| | |||||| Sbjct 29642 GCGCTCGAGGGTCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCACGCTCGTAGATGATGGC 29583 Query 2074020 GGCGTCGAGGGCCTCCTTGTGCGCC 2074044 | |||||| ||||||||| || Sbjct 29582 CGAGTCGAGCTGGTCCTTGTGCTCC 29558 Score = 136 bits (150), Expect = 6e-26 Identities = 290/439 (66%), Gaps = 0/439 (0%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGC 2071633 ||| || || ||||||||||| ||||| || | ||||||| ||||||| |||||||| Sbjct 30486 ACTCGATGATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGC 30427 Query 2071634 TGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCG 2071693 | | ||||| | |||||||||| || ||| |||| ||| |||||| |||| | | Sbjct 30426 TCTTGCGGTTGGCAGCGTCCTTGTAGAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACT 30367 Query 2071694 TGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNN 2071753 || |||||| |||| | | | || || | | | | || ||||||| Sbjct 30366 CGAGGATGGCGTACCAGAGCTTCTGAGCCTTGACAGTGCGCTTGGCACGGCCCTCGGCCT 30307 Query 2071754 NNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCT 2071813 |||| || || || |||||| ||| ||| || ||||| || Sbjct 30306 CGTAGCGCTCGTAGAGACGCTCGAACTCGTCGCCGTAGCAGTCGGCGAGACCGGGGCACT 30247 Query 2071814 CGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGC 2071873 || ||||| | ||| |||||||| ||| | | || || ||| || || ||| Sbjct 30246 CGTTGGGGCACATGAGGGACCAGTCACCGTTCTGCTCGACACGCTTCATGAAGAGATCGG 30187 Query 2071874 ACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTT 2071933 ||| ||| |||| ||||| || || || || ||||||||| ||||||||||| Sbjct 30186 GAACCCAGAGGGCGTAGAAGAGCTCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGC 30127 Query 2071934 TCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGC 2071993 |||||||| | || | || ||| | |||||| ||||| | |||| ||||||||| | Sbjct 30126 GGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAATGTAGATGGCAAAGGCAC 30067 Query 2071994 CCTTGCGCTTGCCGCCGCC 2072012 | |||||| ||| || Sbjct 30066 CGGGACGCTTGTTGCCACC 30048 >seq75 Length=98333 Score = 185 bits (204), Expect = 1e-40 Identities = 240/330 (73%), Gaps = 9/330 (3%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||||||||| || ||| | |||||| || ||| ||||||||||| || ||||| Sbjct 64507 ACCTTCGTCACGCGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACCACGCTT 64448 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| ||| || ||||| ||||| |||||||| ||||| || Sbjct 64447 CTTGAGCCAGAAGATGGAGGCGAAGGAACCGGAGAAGAAGATACCCTCGACAGCGGCGAA 64388 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | ||||| |||||||| |||| | | || || | | ||||||| | ||||| Sbjct 64387 GGCAACGAGACGCTCGGCGAAAGAGGC---GCGCTTGTCGCTGATCCATCGGAGAGCCCA 64331 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGG---TGGTCCTT 794576 || ||||| | | | || ||| | || |||| |||| ||||||| | | || Sbjct 64330 GTCAGCCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAAAGAGGAACTCGCGCTG 64271 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 |||| || || || |||||||||||||||||||||||||||||| ||||||||||| Sbjct 64270 CTCG---GGCTCACGGATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTGGATGTT 64214 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || ||||||||| || || ||||| Sbjct 64213 CTCCATCATGATCTGGAAACCGTAGAAGCA 64184 Score = 131 bits (144), Expect = 3e-24 Identities = 145/192 (76%), Gaps = 11/192 (6%) Strand=Plus/Minus Query 796175 TGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGA 796234 |||| || || | |||||||| ||||| |||||| ||||||||| |||||||||| Sbjct 64154 TGAAACGCTCGACAAGGTTCTCGTTGACGATACCGTCGGAGGCGGCGAAGAAGGCGAGGA 64095 Query 796235 CGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC---GAGACCCAGTGGACCGTG---- 796287 |||| ||| ||||||||||||| |||| ||||| | |||||| |||| Sbjct 64094 CGTGGGAGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTCCCAGT----CGTGGAGA 64039 Query 796288 TCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATC 796347 || | |||||||| |||||||||||||| ||||| ||||||||||| |||||||| Sbjct 64038 TCCTTGGAGAGGTCGATTTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATT 63979 Query 796348 TCCCATATCCGT 796359 | ||| ||| || Sbjct 63978 TGCCAGATCTGT 63967 Score = 95.1 bits (104), Expect = 2e-13 Identities = 152/216 (70%), Gaps = 12/216 (6%) Strand=Plus/Minus Query 794007 CCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCG 794066 || ||||| ||||||| ||||| || ||| | || |||||||||||||| | | | Sbjct 64713 CCAAGCGAAACAAGCAGACGGTCAGCCACGTACTCTATGTACTGGCACATCAATTTCGAG 64654 Query 794067 TTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACG 794126 |||||||| || | | ||||| || | ||| ||| || |||||||||| || ||| Sbjct 64653 TTCATGCCAATCAAAGATACGGGGAGAGCGTCGGTGAGGAAAGCTTTCTCGATTTCCACG 64594 Query 794127 GCCTCGATGATGATCTGCCTGGGCAC---GTC---GGACGACGGCTTGTCGACGAGCATC 794180 |||||| ||||||| | || |||| ||| | || |||| | || | | Sbjct 64593 GCCTCGGTGATGATTT---TGAGCACGGTGTCCGGGTGCGCTCGCTTCTTGAGGTG---G 64540 Query 794181 GTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 || |||| ||||||||||||||| ||||||||| Sbjct 64539 CTGAAGAGGAGGCAGGCAAAGTCGGTGTGCAGACCT 64504 >seq43 Length=143938 Score = 161 bits (178), Expect = 2e-33 Identities = 431/645 (67%), Gaps = 24/645 (4%) Strand=Plus/Minus Query 2411412 GCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTT 2411471 ||||||||||| | |||| | || ||||||| || ||| | |||||| | || Sbjct 139045 GCTCATCTTGCTGCCCTTC---AACCCGGGCACCATCGCGTTCATCAGGTGCGCCCTTTT 138989 Query 2411472 GCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCG-CAAAGGCAAAGATCTTGCGCTGGTCGC 2411530 ||||| || ||| |||||||| | || || | || | |||||||||||||||||| Sbjct 138988 CCGGTACCCGAGCTTCGGCAGGTACT-GCTCGGCGAACGTGAAGATCTTGCGCTGGTCGA 138930 Query 2411531 GCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGT 2411590 ||||| ||||| ||| |||||||||| |||||||||||| ||||||| ||||| Sbjct 138929 CGCCGCCGAACTGCATGTCCACGTCGAGGTACTGCTCGTCGAGCGCCTGCAGACCCGGGT 138870 Query 2411591 AGACGAGGTTGCTGAGCGGCGG-GTTGCGGTCCATCTTGACCACCTGGGCGGCGGCCT-- 2411647 ||| || | |||| |||| | || || ||||||||||| |||| | |||| Sbjct 138869 AGAGCAGCCCGGAGAGCAGCGGCGACGC-CACCTGCTTGACCACCTCGGCGCCCGCCTTC 138811 Query 2411648 TTTGCGCCGTGCCGACGGTCACGCGCGCCGTCAGGCGCAAGAGGTCGAGCGTGTAGGCGG 2411707 || ||| ||||| |||| |||| || ||| || || ||| | |||| || Sbjct 138810 TTGGCGTCGTGC--TCGGTGACGCTGGCGCACAGCCGGTAGTTGTCCATGTTGTACGCCT 138753 Query 2411708 CGCCATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCAGCGGGACGCCAATGT 2411767 || ||||||| ||||||| || || | | || || || ||||| || Sbjct 138752 CGGTGAGCTGGTAGCTGCTGCCGACGACGAAGACCAACCGGTCGGTGGGCACGCCGATCG 138693 Query 2411768 GCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCAC-CGGTGCTCGACGAGGTCC 2411826 || || | ||| ||| | | ||| | || ||| ||||| || || || Sbjct 138692 CCTTGAATACGGCGGTGAGCACGTGCCGGTAGTA-CGTCACGCGGTGGCGCACCAGCTCG 138634 Query 2411827 CACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACC-CG 2411885 ||||| |||| ||||||||| || || | |||||| | ||||||| | ||| || Sbjct 138633 ATCGGCGCCTTGAGGTTGTCGAGGAACGCATGGATGTCGGCGAGGAGGATCTTGACCTCG 138574 Query 2411886 ACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCCCAGATGGGG 2411945 || ||||| | || |||||||| | || | ||||| | |||||| | || || Sbjct 138573 AC-GCCGGCGCGCAGGAAGTCGGCGATCTTGGTCAGCGGCACGAGGTAGCCGACGTGCGG 138515 Query 2411946 CTTGCCCGTCGGCGCGGTGCCCCAATAAATGCAGAGAGGGCGCTCGGCC------ATGAT 2411999 | ||| || || || || ||||| || | || | ||||||||| || | ||| Sbjct 138514 CCGGCCGGTGGGAGCCGTACCCCAGTAGGCGGAGGGCGGGCGCTCGTCCTTTTCGAGGAT 138455 Query 2412000 GGCCTTGATGTCGGCCGGGTCGCCGATGACCTCGTCGAGGTCGCG 2412044 | ||||||| | ||| ||||| ||||||||||||||||| Sbjct 138454 CGACTTGATGATGTCCG---AGCCGAGCACCTCGTCGAGGTCGCG 138413 >seq13 Length=272317 Score = 145 bits (160), Expect = 1e-28 Identities = 186/254 (73%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| | ||||||||| || |||| ||||||| ||| || || ||| | | || Sbjct 82537 ACTTGGTGACCGACTTGGTACCTTCCGAGATGGCGTGCTTGGAAAGCTCACCGGGGAGGA 82478 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC- 1485591 | ||||| ||||||||||||||||| || | ||| || |||||| || || Sbjct 82477 TGAGGCGGACGGCGGTCTGGATCTCTCGCGACGAGATGGTCGACTTCTTGTT-GTACGAA 82419 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || || | ||||||||| ||||||| |||| ||||| | ||| |||||||| | | Sbjct 82418 GCGAGCTTGGAAGCCTCGGTGGCGATGCGCTCGAAGATGTCCTGGACGAACGAGTTGAGG 82359 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || | ||| | ||||| ||||| || ||||||||| ||||||||||| || ||| Sbjct 82358 ATAGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGACACGGTAG 82299 Query 1485712 ACAAAGGACGAGTA 1485725 | ||| |||||| Sbjct 82298 ATGTAGGTCGAGTA 82285 >seq6 Length=350643 Score = 134 bits (148), Expect = 2e-25 Identities = 221/314 (70%), Gaps = 6/314 (2%) Strand=Plus/Plus Query 429508 CGCTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGA 429567 |||||||| ||| |||| ||||||||||||||| || ||| ||| || | | Sbjct 330227 CGCTCCAGCCCGGCTGGATCGTCGAGCGCCACCTCAAGGATGGTGACTACGTTCTCTTCA 330286 Query 429568 ACCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCG 429627 |||| ||||| ||| | |||| | ||||||| | |||| | | || |||| | Sbjct 330287 ACCGTCAGCCCTCGTTGCACAAGATGTCGATGATGTCGCACAGGATCAAGCTCATGGACT 330346 Query 429628 GTCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCG 429687 ||||||||| |||||||| ||| ||| | ||||||||||||| || || || | Sbjct 330347 ACTCCACCTTCCGTCTCAACCTCAGCGTCACGCCCCCCTACAACGCCGATTTCGATGGTG 330406 Query 429688 ACGAGATGAACCTGCACGTGCCCCAG-TCGGAGATGGCACGCGCCGAAGTCGCCCACA-- 429744 ||||||||||| |||||||||| ||| || ||| | | || ||||| || | || | Sbjct 330407 ACGAGATGAACTTGCACGTGCCTCAGAGCGAAGA-GACCCGTGCCGAGCTCTCGCAGATC 330465 Query 429745 CCATGGGCGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCG 429804 ||||| ||| | | || || ||||| ||||||||||||||| |||| || ||| Sbjct 330466 GCATGG--GTGCCTCGTCAGATTGTCTCGCCTCAGGCCAACAAGCCCGTCATGGGTATCG 330523 Query 429805 TGATGGACGCCCTC 429818 | |||| | ||| Sbjct 330524 TCCAGGACACGCTC 330537 >seq16 Length=261230 Score = 93.3 bits (102), Expect = 7e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||||||||| | ||||| ||| | |||||||| |||||||||||||||||||||| Sbjct 202235 AGGTCGACCAGGAAATGCTCTTCGAGATCATCCTCGCAGCCAACTACCTCGACATCAAGC 202294 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTG 2035700 |||||||||| | || |||||||| ||| Sbjct 202295 CCCTCCTCGACGTTGGATGCAAGACTGTG 202323 >seq25 Length=198755 Score = 89.7 bits (98), Expect = 8e-12 Identities = 137/190 (72%), Gaps = 9/190 (5%) Strand=Plus/Plus Query 653648 CCCGAGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGGCAGCGTG 653707 || ||| | |||||||| | || ||||| ||||| || |||||| |||| | | || Sbjct 170194 CCGGAGCTCGGCGACAAGTTCTCCTCGCGTCACGGCCAGAAGGGC---GTGGTCGGACTG 170250 Query 653708 CGC-TCGACC--GAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTC 653764 | || | | || || ||||||| || ||| | ||| | || || |||||| || Sbjct 170251 ATCGTCCAGCAGGAAGATATGCCGT--TCACCGACCAGGGCATCAAC-CCGGACATCATC 170307 Query 653765 ATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCCTG 653824 || || ||||||| | |||| ||||||||||| ||||||||||||| ||| ||| | Sbjct 170308 ATGAATCCGCACGGCTTCCCCTCGCGCATGACGGTGGGCAAGATGATCGAGCTGCTCTCG 170367 Query 653825 GGCAAGGTGG 653834 ||||||| || Sbjct 170368 GGCAAGGCGG 170377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914606955265868