Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq25 138 1e-27 >seq25 Length=198755 Score = 138 bits (152), Expect = 1e-27 Identities = 454/703 (65%), Gaps = 36/703 (5%) Strand=Plus/Minus Query 146827 AAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGG 146886 ||||| || | |||||||||| || |||| | | |||| || ||||||||||| Sbjct 54572 AAATCCTCGTACTTGAAATCGTCGATATCCTTGATCTCCCTCTTGATGCTGAGCTTGGGG 54513 Query 146887 AAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACG 146946 || || || | || ||||||| | |||| ||||| ||||| | ||| ||| Sbjct 54512 AATGGCAACGGATCTCTCTCCAGCTGCACCTTCAACGGCTCGACGTGATCCTTGTACACG 54453 Query 146947 TGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACC 147006 ||||| || |||| || ||| || || ||||| | ||||| | ||| | | Sbjct 54452 TGCGCATCTCCCATGGCCAACACCAACTCTTTCGGCTCGCAATCCGTCACCTTGGCGATC 54393 Query 147007 ATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCC 147066 |||||||| | ||||| ||||| || |||||||| || || ||||| |||| || | Sbjct 54392 ATGTAGGTCAACAGCGCATAGCTCGCGATGTTGAACGGCACACCCAGACCCAAATCGCAG 54333 Query 147067 GACCTCTGGTACAGCTGGCACGAGAG--------------CTCCC----------CGTC- 147101 || | |||||||| ||| || ||||| | ||| |||| Sbjct 54332 GATCGCTGGTACATCTGACAGGAGAGGTGTTTCTTACCTTCGCCCTTGGCGTACGCGTCG 54273 Query 147102 -----GGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAG 147155 || |||| | ||||| ||| | |||||||| || ||||| |||||| || Sbjct 54272 AGGTTGGACACGAAGAACTGCGCA-AACATGTGGCAAGGGGGCAGAGCCATGAGTTCGAG 54214 Query 147156 GTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCT 147214 ||| |||||||| || || || | || | | || |||||| | |||| Sbjct 54213 ATCCTTCGGGTTCCATGCGCTGAGCAAGATGCGTC-GATCGGTGGGGTTGTTGCGGATCT 54155 Query 147215 CTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCA 147274 ||||| || |||||||| ||||| || || ||| | || ||||||| Sbjct 54154 TGTCGATGACTTGGGCGAGCTGGTCTACGCCTTGCCCTGTGTAATCTGCGTCGCAGTCGG 54095 Query 147275 CGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCT 147334 ||| || |||||||| | ||| ||||||||||| || || |||| |||||| Sbjct 54094 TGTAGGATGCGCCAAAGTGTCGCCATTGGAAGCCGTAGACGGGGCCCAAGTCGCCTTCAC 54035 Query 147335 TTCTGTGCGAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATG 147393 | ||| |||| ||| || | | ||| || ||| | || |||| ||||||| || Sbjct 54034 GGCGGTGGGAGAGGCCACGAGAG-TCGAGGAATTCGCGCGATCCGTTACCGTCCCAAATA 53976 Query 147394 CCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGC 147453 ||||||||| | | |||| ||| || || || ||| | ||||||||| ||| Sbjct 53975 TGAACTCCCTTGTCCGTGAGCAGCTTCGAATCGGTCTTGCCAGCTACGAACCAGAGAAGC 53916 Query 147454 TCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCA 147496 ||||||| || || | | ||||||| || || || |||| Sbjct 53915 TCCTCCAGCACTCCGCGGAAGAAGACCCGTTTCGTCGTGAGCA 53873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583375591036800