Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq75 89.7 2e-12 >seq75 Length=98333 Score = 89.7 bits (98), Expect = 2e-12 Identities = 293/447 (66%), Gaps = 15/447 (3%) Strand=Plus/Plus Query 443433 GCCTTCTTTGCACCGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTAC--- 443489 |||||||| || | ||||||||||||| ||||| || || ||||||| | Sbjct 64100 GCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTTGTCGAGCGTTTCAGCTCT 64159 Query 443490 GAAATGGTAGTGTACACCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAAC 443549 ||| || | | |||||||||| | |||||||| ||||| | ||||||||| Sbjct 64160 GAA---GTTCAGGCCGCCGAGGCCCGTTGCTTCTACGGTTTCCAGATCATGATGGAGAAC 64216 Query 443550 ATTCACGCCGAGGTCTACAGTCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAG 443609 || ||| | ||| |||| | | ||| | || ||| |||| || ||| ||| Sbjct 64217 ATCCACTCGGAGACCTACTCGCTCCTCATCGACAC-CTACATCCGT--GAGCCCGAGCAG 64273 Query 443610 CG---GTCCATCTTCTCATCGTTCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGG 443666 || || | |||| | || ||||| || | | ||| | ||| || |||| Sbjct 64274 CGCGAGTTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAGGCTGACTGG 64333 Query 443667 GCAAAACAGTGGCTCGAACGAGAAAATCTCAGCTT-CGTCGAGCGACTAGTCGCTTTTGC 443725 || | ||| || | ||| || | | ||| || |||||| || || || || || Sbjct 64334 GCTCTCCGATGGATC-AGCGACAAGCGCGCCTCTTTCGCCGAGCGTCTCGTTGCCTTCGC 64392 Query 443726 TGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGC 443785 | ||||| || | || || ||| ||| ||||||||||||||| | || |||| Sbjct 64393 CGCTGTCGAGGGTATCTTCTTCTCCGGTTCCTTC-GCCTCCATCTTCTGGCTCAAGAAGC 64451 Query 443786 GTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGC 443845 |||| || |||| |||||| || || ||||| || ||| || ||||| ||| ||| Sbjct 64452 GTGGTCTCATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCGCGTGACGAAGGTCTGC 64511 Query 443846 ATTGCGACTTCGCCTGTCTTCTCTACA 443872 | |||||| ||||| || |||| || Sbjct 64512 ACACCGACTTTGCCTGCCTCCTCTTCA 64538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588022357246340