Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20iseilematis- ciliati_20[genbank_20GCA_5F001748505.1_202016-09-28] 15,412 sequences; 23,207,148 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq141 260 2e-64 seq2 141 1e-28 seq75 138 1e-27 >seq141 Length=34748 Score = 260 bits (288), Expect = 2e-64 Identities = 1124/1751 (64%), Gaps = 57/1751 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || ||| ||||||| || || | ||||| | | | Sbjct 29682 CCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGTCAGGACATCGCCAGCGCC 29741 Query 104282 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || ||||| ||| ||| || | ||||| | || |||||||| Sbjct 29742 ATCGAGACCTACAACCTCATGTCGCAAAAGTACTTT-ACCCACGCCTCGCCCACCCTCTT 29800 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || ||||| || || || | || || ||||| || ||| ||||| || Sbjct 29801 CAACGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGTTTCCTCGTCACCATGAAGGACGA 29860 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| |||| ||||| | || || | | || || ||||| ||| || || Sbjct 29861 CTCCATCGACGGCATCTACGACACGCTCAAGACCTGCGCCATGATCTCCAAGACCGCCGG 29920 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 ||||| || | ||||||| | | | || | || ||| || || || Sbjct 29921 TGGTATCGGTCTCAACATCCACTGCATCCGTGGCACTGGCTCCTACATTGCCGGCACCAA 29980 Query 104521 TGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 ||| | || | ||||| |||| ||||| ||||| || ||| ||| || ||||| | Sbjct 29981 CGGTGTTAGCA-ACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTACG 30039 Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | | || | ||| ||||| || | | || |||| |||||||||||| Sbjct 30040 TCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACATTGAGCCATGGC 30096 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 || |||| || | |||||||| || | || ||||| ||| | ||||||| || | Sbjct 30097 ACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGTAAGGAGGAGGTTCG-T 30155 Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 || || || ||||||| ||| |||||| |||| ||||||||||||||| | || ||| || Sbjct 30156 GCTCGTGAGCTCTTCTACGCCCTCTGGGTTCCCGATCTCTTCATGAAGCGTGTCGAGCAG 30215 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | || | ||||| ||| | || || || || || |||||| |||| | || Sbjct 30216 AACGGTGACTGGTCCCTCATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTGCTACGGC 30275 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG-ACGGT 104871 || ||||| || || ||| ||||||| || || || || | ||| || || Sbjct 30276 GACGAGTTCGAGCGTCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCAA-GCGCACTGT 30334 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 ||| | || | | ||| | || || ||| |||| || ||||||||||||| || | Sbjct 30335 CAAGGCT-CAGAAGCTCTGGTACGCCATCCTCGAGTCCCAGACCGAGACTGGTAACCCCT 30393 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 ||| || ||||| ||||| |||| ||||| || || ||||| | || |||| Sbjct 30394 TCATCCTCTACAAGGACGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCA 30453 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || | ||||| | || || || ||| | || | | | | || ||| || || | Sbjct 30454 AGTGCTCCAACTTGTGCACCGAGATCATCGAGTACAGTGCCCCCGACGAGGTCGCCGTCT 30513 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 105110 | ||| | || || ||||| ||||||| | | || || | || ||||| | || | Sbjct 30514 GCAACTTGGCTTCCATCGCCCTCCCCACCTTCATCGACCCCGTCACCAAGACCTACGACT 30573 Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170 | |||||||| || | || | || ||| ||||| |||| | || || | Sbjct 30574 TCAAGCGTCTCCACGAGGTCGCCAAGGCCATCTGCAAGAACCTCAACAAGATCATCGACA 30633 Query 105171 GAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 105230 || | |||||||| ||| ||||| | || || ||| | || ||||| || ||| Sbjct 30634 TCAACTACTACCCCGTCGAGGAGGCTCGCAGGTCCAACATGCGCCATCGTCCCATCGGTA 30693 Query 105231 TCGGTGTTCAGGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCACGCATTTGATTCCGA 105288 ||||||| ||||||||||| || | ||||| || | | || |||| || || || Sbjct 30694 TCGGTGTCCAGGGTCTCGCCGACGCCTTCATGATCATGG--GCTACGCTTTCGAGTCGCC 30751 Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348 ||| || |||| | | || || |||||||| || |||||||| || || || Sbjct 30752 CGAGGCTCGTCGTCTCAACGTCCAGATCTTCGAGACCATCTACCACGCCGCCCTCGA-GC 30810 Query 105349 GA--GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406 || || | ||| |||| ||| | || | || || |||| | || || || ||| Sbjct 30811 GATCGTGC-GAGCTGGCTCAGGAGCACGGCACCTACGAGACCTACGCCGGCTCGCCCGCT 30869 Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC------AAGCTTCACTAC 105460 || || || | ||| || | || |||||| |||| ||| || ||| | Sbjct 30870 TCCCAGGGTGAGCTCCAGTACGACATGTGG---GGTGTCACCCCCTCGAACCTT---TGG 30923 Query 105461 GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 ||||||| | ||||||| ||| || | |||||||| ||| |||||| | Sbjct 30924 GACTGGGCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTTCGCAACTCGCTCCTCCTC 30983 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 ||||| ||||| || ||||||||| || ||| |||| || || ||||| || || Sbjct 30984 GCTCCCATGCCTACTGCCTCCACCAGTCAGATCCTGGGCTTCAACGAGTGCTTCGAGCCT 31043 Query 105581 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 105640 ||||| | || ||||| | | | ||||| || ||||| | | ||||| Sbjct 31044 TACACCTCCAATATCTACTCGCGTCGTGTGCTCGCCGGTGAGTTCCAGGTCGTCAA---- 31099 Query 105641 CATCTCGTGGAT----GACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 105696 | || || | | || ||| ||| ||||| ||| | | |||||| | | Sbjct 31100 CCCCTGGTTGCTCCGCGAGCTCGTCGAGCAGGGTCTGTGGAACGACACCATGAAGAACCG 31159 Query 105697 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAA 105756 ||| | ||||||||||| || || | | || || | || ||||| Sbjct 31160 CATCATCGCCCACGGTGGTTCCATCCAGAACGTGCCCGGCATCCCCGACCGCATCAAGAA 31219 Query 105757 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 105816 | ||||| || || ||||| |||| ||||| ||||||||||||| || || || Sbjct 31220 GCTGTACAAGACCGTCTGGGAGATCAGCCAGAAGGCCATCATTGACATGGCTGCCGACCG 31279 Query 105817 TGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCAT---GGAAAGTCCAACG 105871 |||| ||||| | |||| ||| | || || | | || | ||| | Sbjct 31280 TGGTGCTTTCAT--CTGCCAGTCGCAGTCGCTCAACATCCACCTTTCGGCA--CCCACCT 31335 Query 105872 ATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATG 105931 || | ||||| | || |||||| | ||| | ||||||||||||||||| || || | Sbjct 31336 TTGGTC-AGCTCACCTCGATGCACTTCTACGGATGGAAGAAGGGTCTCAAGACCGGTACC 31394 Query 105932 TATTACCTCCG 105942 || |||||||| Sbjct 31395 TACTACCTCCG 31405 >seq2 Length=407147 Score = 141 bits (156), Expect = 1e-28 Identities = 207/293 (71%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| ||||||||||||||||| |||||||||| ||| ||| ||||||||||||| | Sbjct 60899 TTGATGATGAGACCCTTGATGTGCGAACCGTCGTGATCCTGATCGGTCATGATCATGATA 60958 Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279 | || || || || | || || |||| | ||| || || || |||||||||||| Sbjct 60959 CTGCCGTATCGCAGACTGTTCACGTCGAGATACTGCTTGCCGTGCTGGAGACCCAAGATC 61018 Query 169280 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACA 169339 | ||||| | |||| || ||| ||| ||| | ||||| || || || Sbjct 61019 TCCTTGATGGCTTTGATTTCGGCGTTCTTCATGATCTGGTCGTGCGAGGCTTCACGGACG 61078 Query 169340 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGA 169399 ||| ||| ||||| || ||||||||||| |||| || | || || || | | Sbjct 61079 TTCAAGAGCTTACCACGGAGCGGGAAGACACCATAGTTGTCTCTTCCGACCTCGACAATA 61138 Query 169400 CCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 || ||||| ||||| | ||| || |||||||| ||||||| |||||| || || Sbjct 61139 CCGGCGACAGCGAGCGACTTGGCGGAGTCACCTTCGGTGAGGATGAGTGTGCA 61191 >seq75 Length=98333 Score = 138 bits (152), Expect = 1e-27 Identities = 127/161 (79%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 || || || ||||| ||| | || || || ||| ||||||||||||||||| |||||| Sbjct 64364 TCTTTCGCCGAGCGTCTCGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCCGGTTCC 64423 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 ||| | | || | |||||||||||||| ||||||||||| |||||| ||||||||| Sbjct 64424 TTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACTTTCTCCAAC 64483 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| ||||| |||||||| || || ||| || ||||| Sbjct 64484 GAGCTCATCTCGCGTGACGAAGGTCTGCACACCGACTTTGC 64524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583148434806880